Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00007 ATGGAAAATGAGGATTCTGTCGACGTTGTTTCAACTGATGTATCTTATAGTGATACGGCTGAAGCTGGGTTAAGTGATTACGAGGATGACAGTGAGTCGAAATGTAGTGGATTCGAAGGTTCGGATGATAGTGTTGACAGTGATGATGGTGATGACAGTGATGCTGCTGCTGCTACTGATGATGATGAAGATAAAGACGATCGCGATGATTCGGCTAGAGTAAATGCAGAAGTAAATGTAGGTGATAGAATGGTACGTATCAATTCCATTACTGCCGATGAAATTGCTGCGTTGGAATTTTCTAATGTTGAGGAAGCATATGAATTTTATTATCGTTATGGCAAGTGTAAAGGATTTTCCGTTAGAAAACATGATCGTAGGTATGGAGGGCCTAAAAGTAATAGAAAACTATATATGAAGAAATTTGTATGTAGTAAACAGGGATTAAGAGATAAGAAACACTTATGTAGGGTAGATAGGAAAAGGGATCATAGACGATTGACCCGTTCTGATTGCAAAGCTAGACTTCGTGTGAACTACAAACCCAACAAGGGTAAATATGTAGTGTCATTGTTTGAGGAGGGTCATAACCATGAATTAACACCATCTCAGTATGTGCACCTGCACCCAGTTTTTCGTAAAATTTCAGCATCGGATAAAGCTCAAATTGACAGTCTTCAGTCACATGGTATTAGAACCTGTCATATAATGGGGTATATGGTTGCTCAGAAGGGTGGGTATGATTGTGTTGGGTTTACGAAGAAAGATTTGTACAATTACTTTGATAAAAAAATGCGTGGTATTACTAAAGACGGTGATGTTCAAGCTTCGCTTAATTATCTGAATGCGAAGACTATTACTGATCCCATGCTATATGCTAAATACGATGCTGACAGTGTCGATGGACGAATGAAGTGTCTTTTTTGGGCTGATGGGATTTGTAGATCTGACTACTTTTGTTTTGGTGATGTGGTTGCCTTTGACACCACTTATAAGAAGAACAAATATAACTACCCGTTAGTTATATTCTCTGGTTCTAACCACCACGGTCAGACAGTTATTTTTGCCACTGCCTTGGTATCAGATGAAACCACAGATACCTATAAGTGGGTGTTGAGTTGTTTTTTGGACTGCATGGAAAACAAACACCCAAAAGCAGTGCTGACAGATGGGGATGGGGCTATGAGGGAAGCAATAAAGCATGTTTTTCCCCACTCTACTCATAGGTTATGTTCCCGGCATTTGAATAAGAATGCTTATGAAAATGTAAAGTGTTCACAATTTTTGGACGAATTTCAAAAAGCCTTGTACTGCAATTTTACTGTTAATGAATTTGAAGAGTTTTGGATAGATTTGGTTAAAGATTCTGGAGTTGAAGGACATCCATGGGTTGTCAAAACGTATGAAAACAGGTCAATATGGGCTTGTGCGTACTTACGTGATAGGTTTTTTGGACGTTTCAGAACTACGTCGCAATGTGAAGCTATTAATGCAATTATCAAGTGTTATGTTAGGAGGAAAAGTTGCATTTATGAATTTATGAACAATTTTGACCTGGTTGTGAGAGGATACAGGAACAATGAGGTAGTAGCTGATTTTACATCAAAGTATACAGAACCTGTGTTGACAACCCACTCGCGTTTGATTGAGTCTCATGCGGCTAACATTTATACAGCGGAGATTTTTAAAGATGTTAAGAATGAGATTACAAAGGCTGGTGCACTGATTGTTAGGCCGTGA 1740 0.3862 MENEDSVDVVSTDVSYSDTAEAGLSDYEDDSESKCSGFEGSDDSVDSDDGDDSDAAAATDDDEDKDDRDDSARVNAEVNVGDRMVRINSITADEIAALEFSNVEEAYEFYYRYGKCKGFSVRKHDRRYGGPKSNRKLYMKKFVCSKQGLRDKKHLCRVDRKRDHRRLTRSDCKARLRVNYKPNKGKYVVSLFEEGHNHELTPSQYVHLHPVFRKISASDKAQIDSLQSHGIRTCHIMGYMVAQKGGYDCVGFTKKDLYNYFDKKMRGITKDGDVQASLNYLNAKTITDPMLYAKYDADSVDGRMKCLFWADGICRSDYFCFGDVVAFDTTYKKNKYNYPLVIFSGSNHHGQTVIFATALVSDETTDTYKWVLSCFLDCMENKHPKAVLTDGDGAMREAIKHVFPHSTHRLCSRHLNKNAYENVKCSQFLDEFQKALYCNFTVNEFEEFWIDLVKDSGVEGHPWVVKTYENRSIWACAYLRDRFFGRFRTTSQCEAINAIIKCYVRRKSCIYEFMNNFDLVVRGYRNNEVVADFTSKYTEPVLTTHSRLIESHAANIYTAEIFKDVKNEITKAGALIVRP 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00007 579 Pfam MULE transposase domain 324 418 IPR018289 -
Trre13g00007 579 Pfam FAR1 DNA-binding domain 108 201 IPR004330 -
Trre13g00007 579 PANTHER OS01G0519700 PROTEIN 95 571 - -
Trre13g00007 579 MobiDBLite consensus disorder prediction 27 41 - -
Trre13g00007 579 MobiDBLite consensus disorder prediction 1 75 - -
Trre13g00007 579 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00007 Trre-Chr13 129085 130824 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre13g00007 MULE 7.1e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00007 - - tpra:123887991 781.556