Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00006 ATGGAAAATGAGGATTCTGTCGACGTTGTTTCAACTGATGTATCTTATAGTGATACGGCTGAAGCTGGGTTAAGTGATTACGAGGATGACAGTGAGTCGAAATGTAGTGGATTCGAAGGTTCGGATGATAGTGTTGACAGTGATGATGGTGATGACAGTGATGCTGCTGCTGCTACTGATGATGATGAAGATAAAGACGATCGCGATGATTCGGCTAGAGTAAATGCAGAAGTAAATGTAGGTGATAGAATGGTACGTATCAATTCCATTACTGCCGATGAAATTGCTGCGTTGGAATTTTCTAATGTTGAGGAAGCATATGAATTTTATTATCGTTATGGCAAGTGTAAAGGATTTTCCGTTAGAAAACATGATCGTAGGTATGGAGGGCCTAAAAGTAATAGAAAACTATATATGAAGAAATTTGTATGTAGTAAACAGGGATTAAGAGATAAGAAACACTTATGTAGGGTAGATAGGAAAAGGGATCATAGACGATTGACCCGTTCTGATTGCAAAGCTAGACTTCGTGTGAACTACAAACCCAACAAGGGTAAATATGTAGTGTCATTGTTTGAGGAGGGTCATAACCATGAATTAACACCATCTCAGTATGTGCACCTGCACCCAGTTTTTCGTAAAATTTCAGCATCGGATAAAGCTCAAATTGACAGTCTTCAGTCACATGGCCGTGAGAAATTAAAGATTGCTGCCGAAGGTGGTTACAACATTGCAAAATACGTGTACGGTATGATAATGCTGTGTTCTGAAAATGATGAGTCAAGGAATGAAGGAATCAAACATATCCGTTATTTGAGGATGAATAAATGTTTGTTCTATTGTAGAAGAAGGATGTATGAAAGACACTCATATTTTTGGAGCCCTAATGGGATGTTGGTTCGCAATCAAACTCCTGTGTGCAAATCAAGGCCAGCATGCGGGGGATGGCGATTGAAGAAAGGTTTATGGGTAATCCAAGATGATGAAGACGATGATTTGGCATCATGCGAATATTGTAGATGCGATGAGGAGTTGAAGTACTTTTATAGTATGTTTAATATTCCTTATATTGAATAG 1077 0.3863 MENEDSVDVVSTDVSYSDTAEAGLSDYEDDSESKCSGFEGSDDSVDSDDGDDSDAAAATDDDEDKDDRDDSARVNAEVNVGDRMVRINSITADEIAALEFSNVEEAYEFYYRYGKCKGFSVRKHDRRYGGPKSNRKLYMKKFVCSKQGLRDKKHLCRVDRKRDHRRLTRSDCKARLRVNYKPNKGKYVVSLFEEGHNHELTPSQYVHLHPVFRKISASDKAQIDSLQSHGREKLKIAAEGGYNIAKYVYGMIMLCSENDESRNEGIKHIRYLRMNKCLFYCRRRMYERHSYFWSPNGMLVRNQTPVCKSRPACGGWRLKKGLWVIQDDEDDDLASCEYCRCDEELKYFYSMFNIPYIE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00006 358 MobiDBLite consensus disorder prediction 1 74 - -
Trre13g00006 358 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 240 - -
Trre13g00006 358 Pfam FAR1 DNA-binding domain 108 201 IPR004330 -
Trre13g00006 358 MobiDBLite consensus disorder prediction 27 41 - -
Trre13g00006 358 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00006 Trre-Chr13 129085 131206 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre13g00006 FAR1 1.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00006 - - tpra:123887991 223.787