Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04795 ATGTCTCATAGGAATAATGATTCTAATTATACTTCAATACCTGTTAGCTCATCATATCTAGAATTACAACCTCATCATCATTCATCAAATTCTTTTCAAAGGTTGTCTTTTGATGATGGTGGTGGGTTTTTGGGATCTAAGGTTGTTGTTAATGATAATGATGATGATGATGATGTTGATTTAGAAATTGATATTGATAATTATCCTCTTGTTGTTGGGCCTAATCCAAATTATGGTTCTGGTGTACCTGGTGCTGTGTTCAATTTGACTACTACTATTATTGGGGCAGGACTTATGGCTCTTCCTGCTACAATGAAAGTTCTTGGTGTGGTTGTTGGGATTGTGTTGATTATTTTGATGGGGATTTTGTCTGAAATTAGTGTCGAATTGTTGGTTCGTTTTTCTGTTTTGTGTAAAGCATCTTCTTATGGTGAGGTTGTTCAAGAAGCTATGGGAAGGCCTGCCAGGATTTTGTCTGAAATTTGTATTATTTTGAATAATGCCGGTGTTTTGGTGGTTTATTTGATTATAATGGGTGATGTTATGTCCGGTTCGGTTCATCATTTGGGGGTTTTTGATCAGTTAATGGGGAATGGGGTTTGGGATCAGAGGAAGATTGTGATTCTTGTTGTTATGGTGGTTTTTCTTGCACCTCTTTGTTCACTTGATAAGATTGATTCGTTGAGTTTGACTTCAGCTGCATCGGTCGCTCTCGCTGTCATGTTTGTCGTCGTTACATTCACTGTTGCATCTATTAAGCTTGTTGAAGGAAAAATTGATGCTCCTAGGATGGTTCCTGATTTTAGCTCGAAAAAGGCTATTTTGGATTTGCTTGTTGTGATTCCAATCATGACAAATGCATATGTTTGTCATTTTAATGTGCAGCCGATATACAATGAGCTTGAAGGTAGGTCACCGCAGAAGATGAACCGAGTAGGAAGGTTCACCACAATTTTGTGCATCCTGGTTTATGCTGCAACAGCGCTCTCCGGTTATCTATTATTTGGGGAAGATACTGAGTCAGATGTCCTGACTAATTTTGATAAGGATCTTGGAATTCGGTTTAGTTCGGCCTTGAACTATATCGTTAGAGTTGGCTATGTTCTCCATTTGATACTTGTCTTCCCTGTTATTCATTTCTCGCTACGCCAAACGGTGGATACCTTGGTGTTTGAAGGATCGCCTCCTTTGGCAGAAAGTAGGAAGAGATCATTAGGGCTGACTGCGATTCTGTTGGTCCTGATATATATTGGTTGTACCATGATACCAAACATTTGGACAGCTTTTAAGTTCACTGGCGCAACAACGGCAGTTTCGTTAGGTTTCATATTCCCACCTCTTGTTGCAATTAGATTAAGTCATAAATGGGATTTGAGCTATGTAGAATGGTTTTTATCATGGTTAATGTTGGTATTGGCTGTGACTGTTAGCATTGTAGGAGTCATTGGCAATGTCTATAGCCTCGAGAGTAAGTCTTAG 1479 0.3901 MSHRNNDSNYTSIPVSSSYLELQPHHHSSNSFQRLSFDDGGGFLGSKVVVNDNDDDDDVDLEIDIDNYPLVVGPNPNYGSGVPGAVFNLTTTIIGAGLMALPATMKVLGVVVGIVLIILMGILSEISVELLVRFSVLCKASSYGEVVQEAMGRPARILSEICIILNNAGVLVVYLIIMGDVMSGSVHHLGVFDQLMGNGVWDQRKIVILVVMVVFLAPLCSLDKIDSLSLTSAASVALAVMFVVVTFTVASIKLVEGKIDAPRMVPDFSSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRSPQKMNRVGRFTTILCILVYAATALSGYLLFGEDTESDVLTNFDKDLGIRFSSALNYIVRVGYVLHLILVFPVIHFSLRQTVDTLVFEGSPPLAESRKRSLGLTAILLVLIYIGCTMIPNIWTAFKFTGATTAVSLGFIFPPLVAIRLSHKWDLSYVEWFLSWLMLVLAVTVSIVGVIGNVYSLESKS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04795 492 PANTHER AMINO ACID TRANSPORTER 78 476 - -
Trre12g04795 492 Pfam Transmembrane amino acid transporter protein 81 483 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04795 Trre-Chr12 61528938 61530416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04795 7 492 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.660 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04795 - - gmx:100791860 775.393