Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04688 ATGGAGAGTGTAAAAGTACCTTTCAATGGTATTGTAACCGATTTTAGGGGAAGAGCATTGCACTATAAAGATGATTGGATTTCTGGTCTCACTTCAGGAATAGGGATATTGGCGCCAACTACATATATTTTCTTTGCTTCTGCTTTACCGGTTATTGCTTTCGGTGCGCAACTTAGTAGGGACACAGATGGAAGCTTGAGTACTGTAGAAACATTGGCTTCTACAGCCATTTGTGGAATCATACACTCCATTTTTGGTGGACAACCTCTGCTAGTACTAGGAGTGGCAGAACCTACTATCCTTATGTACACCTATTTGTACAATTATGCCAAAAATAAGGAAGGATTAGGAAGAGAACTCTTTTTGGCTTGGGTAGGATGGGTTTGTGTATGGACTGCTCTATTGCTATTTCTTTTAGCAATACTCAATGCTGCCGTTATCATCAATAGATTTACAAGGATTGCCGGTGAGCTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCAATCAAGGGAATGGTAACTGAGTTTCAAGTTCCTAAAGAGAGTGATCCAACATTGGATAAGTTCCAATTTCATTGGCTCTATGCAAATGGATTACTTGGTGTTATATTCACCTTTGGCCTTCTCTATACTTCTCTAAAAAGCAGAAGAGCAAGATCATGGTTATATGGAACAGAATGGTTAAGAAGTTTCATAGCAGATTATGGAGTACCATTCATGGTAGTTATGTGGACAATTTTATCATTCACAGTAGTAACAAGTAAAGTTCCTTCGGGAGTTCCGAGAAGGCTCATTGCACCTTTGGCTTGGGAATCTACATCATTACATCACTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCAACACACATTTTTGAGGCTTTTATTCCTGCCATAATGATAGCAGGACTTTACTTCTTTGACCATAGTGTTGCATCCCAAATGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGACTAATTGGCCTGCCTCCTTCAAATGGAGTTCTGCCTCAATCCCCTATGCACACCAAGAGTCTGGCTGTTCTCAAGAAACAGTTGATCCGACGAAAGATGGTTAAAAGTGCAAAGGAAAGCATAAGGCTGAAAGCTAGCAATTCTGAAATATATGGAAAGATGCAAGAAGTGTTTATAGAAATGGATAATAATCCTAATAATCATTTGGTGGTAAAAGAACTAGAGGATTTAAAAGATATTGTTCTAAATGGTGAAGATAATGGAGACAACAATAAGAACACATTTGATCCTGAGAAACACATTGATACATATTTGCCTGTAAGAGTAAAAGAGCAAAGAGTGAGCAACCTTTTACAATCACTCTTTGTAGGAGGAGCAGTGTTTGCTATGCCTGCCATAAAAATGATACCAACTTCAGTCTTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGATATTGCTTCTCTTTGTAAGGCCTAGTAGGTGGTACAAGTTGTTGGAAGGTAGTCATGCTTCCTTTGTTGAGTCAGTACCTTTCAGATACATAGTCTTATTTACAGTCTTCCAATGTGTGTATTTCTTGATTTGTTTTGGAGTGACATGGATTCCCATTGCTGGAATGTTGTTCCCTTTGCCTTTCTTTTTGTTGATCACATTGAGACAACATATACTCCCCAAGATATTCAGTCCAAACCATCTTAGGGAACTAGATGCAGCTGAATATGAAGAAATACCTGGTGCTCCAAGACTAAGTTTCAATCTATCCTTCAAGGAGGAGGTTCAATCACCTGAAAGTGTATCAAAGGAAATAGGTAATGCTGAAATGTTAGATGAGTTAACCACTAATAGAGGAGAGTTGAAGGTTAGAACTATTAACTCTACTGAGGAAAGAAATTATCAGGTTTATCCTGACGAAATTGATTCACACTCGGAAAGAGATACTCTGCAGTGA 2025 0.3862 MESVKVPFNGIVTDFRGRALHYKDDWISGLTSGIGILAPTTYIFFASALPVIAFGAQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLVLGVAEPTILMYTYLYNYAKNKEGLGRELFLAWVGWVCVWTALLLFLLAILNAAVIINRFTRIAGELFGMLITVLFIQEAIKGMVTEFQVPKESDPTLDKFQFHWLYANGLLGVIFTFGLLYTSLKSRRARSWLYGTEWLRSFIADYGVPFMVVMWTILSFTVVTSKVPSGVPRRLIAPLAWESTSLHHWTVIKDMGKVSPTHIFEAFIPAIMIAGLYFFDHSVASQMAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIRLKASNSEIYGKMQEVFIEMDNNPNNHLVVKELEDLKDIVLNGEDNGDNNKNTFDPEKHIDTYLPVRVKEQRVSNLLQSLFVGGAVFAMPAIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVRPSRWYKLLEGSHASFVESVPFRYIVLFTVFQCVYFLICFGVTWIPIAGMLFPLPFFLLITLRQHILPKIFSPNHLRELDAAEYEEIPGAPRLSFNLSFKEEVQSPESVSKEIGNAEMLDELTTNRGELKVRTINSTEERNYQVYPDEIDSHSERDTLQ 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04688 674 Gene3D Helical hairpin bin 18 60 - -
Trre12g04688 674 PANTHER ANION EXCHANGE PROTEIN 5 603 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre12g04688 674 Pfam HCO3- transporter family 200 375 IPR011531 GO:0006820|GO:0016020
Trre12g04688 674 Pfam HCO3- transporter family 455 545 IPR011531 GO:0006820|GO:0016020
Trre12g04688 674 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04688 Trre-Chr12 60798361 60802285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04688 1 671 Antiporters AT1G74810 68.491 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04688 K24194 - gmx:100811184 1127.08