Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04557 ATGATTAGAAAACATCAAATTTGCAATGGCAAATTAGCTACTGATATTACTGCTGAAACACTAGGTTTCAAGTGGTATGCACCAGCATATCTCAGTCCTCAAGCAACAGGAAAAAACCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCATCCGGTTATGATGAAAAGGCTGCTATTTTGAATCATGCGATTCCATTATCGCAACAGTTAAAATATTACATGAAATACCAAAGCAAGCTGACCAAGATAGCTGGTAGACAAAATGCAGCATCAATTATTAAAGTTGTTGCTCCTGATCAATATTCTGCATGCCTTGTGGATGCATTCTCAAGTTTTGTTAAGGAGCTAGATAAATTGGAGTGA 363 0.3691 MIRKHQICNGKLATDITAETLGFKWYAPAYLSPQATGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYYMKYQSKLTKIAGRQNAASIIKVVAPDQYSACLVDAFSSFVKELDKLE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04557 120 PANTHER GDSL ESTERASE/LIPASE EXL3 6 94 - -
Trre12g04557 120 Gene3D SGNH hydrolase 3 115 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04557 Trre-Chr12 59703022 59703827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04557 9 93 Pollen Coat Proteome AT1G75910 34.118 1.27e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04557 - - gmx:100795716 166.392