Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04556 ATGAAGATGAATATTAGAGAAGTGTTTTTTGTTATCTTTGCATTTGTGTTATTGACATGGAGGGGGAAAGCACAAGATGATGCAATTGTTCCAGCAATTATTACATTTGGTGACTCTGCTGTTGATGTGGGAAACAATGACTATCTTTACACTATTTTCAAAGCTAACTATCCTCCTTATGGAAGAGATTTTGTCAACCATAGACCCACTGGGAGGTTTTGTAATGGAAAATTAGCTACTGATATTACTGCTGAAACACTGGGTTTTACACGATATGCCCCTGCATATCTTAGCCCTCAAGCAACAGGAAAAAACCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCATCCGGTTATGATGAAAAGGCTGCTATTTTGAATCACGCGATTCCATTGTCGCAACAGTTACAATATTACAAGGAATACCAAAGCAAGTTGACCAAGATTGCTGGTAGAAAAAAGGCAGCATCAATAATTAAAGGTGCATTGTACATATTGAGTGGTGGAAGTAGTGACTTTATTCAAAACTATTATACCAATCCTTTAATCAACAAATTTGTTACTCCTGATCAATATTCTTCATACCTTGTGGATACATTCTCAAGCTTTGTTAAGGATTTGTATAAATTGGGAGCTAGAAAAATTGGAGTAACTTCACTTCCACCATTGGGTTGTCTACCTGCTACAAGAACTTTATTTGGATTTCATGAGAAAGGTTGTGTCACAAGAATCAACAATGATGCACAAGGATTTAACAAGAAAATGAACTCGACCGCAGCGAGACTCCAAAAGCAATTTCCTGGTCTTAAGATCGTTGTCTTTAATATTTACAAACCTCTCTATGACCTTGTTCAATCCCCTTCAAATTTTGGTTTCGCGGAGGCAAGGAGAGGATGCTGCGGAACTGGGATTGTAGAGACGACATCCTTATTGTGTAATCCAAAATCACTAGGAACATGTTCTAATGCAACTCAGTATGTGTTTTGGGACAGTGTTCATCCTTCGGAAGCTGCTAACCGAGTTCTAGCCGATGCATTGATCGTACAAGGCATAAGCCTTATCGGTTAA 1068 0.383 MKMNIREVFFVIFAFVLLTWRGKAQDDAIVPAIITFGDSAVDVGNNDYLYTIFKANYPPYGRDFVNHRPTGRFCNGKLATDITAETLGFTRYAPAYLSPQATGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLQYYKEYQSKLTKIAGRKKAASIIKGALYILSGGSSDFIQNYYTNPLINKFVTPDQYSSYLVDTFSSFVKDLYKLGARKIGVTSLPPLGCLPATRTLFGFHEKGCVTRINNDAQGFNKKMNSTAARLQKQFPGLKIVVFNIYKPLYDLVQSPSNFGFAEARRGCCGTGIVETTSLLCNPKSLGTCSNATQYVFWDSVHPSEAANRVLADALIVQGISLIG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04556 355 PANTHER GDSL ESTERASE/LIPASE EXL3 14 346 - -
Trre12g04556 355 SUPERFAMILY SGNH hydrolase 33 346 - -
Trre12g04556 355 Gene3D SGNH hydrolase 21 350 IPR036514 -
Trre12g04556 355 Pfam GDSL-like Lipase/Acylhydrolase 33 345 IPR001087 GO:0016788
Trre12g04556 355 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
Trre12g04556 355 FunFam GDSL esterase/lipase APG 22 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04556 Trre-Chr12 59697235 59698857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04556 31 347 Pollen Coat Proteome AT1G75910 35.625 4.30e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04556 - - gmx:100795716 606.29