Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04402 ATGATGGATCACCAATCTGGCCAGGGATCATATGGTAGTGACCTTAACGTGATGGCAGAAACCAGTGAGAAACATGACAAAGTAGATGGCAACATTTCAAACAATTTAGAATTATGTGCAGTTGAAGATGAAAGGTTTGTTGAACAACCTGTGGCAGATTCAGACATAATGGAACCATTCATAGGCATGGAGTTCAACACAAGAGAGGAAGCCAGAGAGTTCTACAATGCCTATGGTAGACGGATTGGATTTACAGTACGAGTACACCATAACCGCCGTTCACGAGTTAATAACGAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTATCGAGCAAAGAAGTATGTCCACAGAAAAGATAGAGTGCTCCCTCCTCCACCACCCACCCGAGAAGGTTGTCAAGCCATGGTAAGGATGACTTTACAAGATGGAGGGAAGTGGGTTGTCACCAAATTTGAGAAGGAGCATACACATAAACTGATGAGTCCTAGTGAAGTTCCATGGCGAAGATCTGAGAAGCACCTGATTACTGAGGATGAGAAAGATAGGAGAATCCGTGCGCTATCACTTGAGTTGTACAACGAAAGGCAAAAGAACAAACGACGTTGTGCAGCATATGAAGAACAGATAAATATGATTCTGAATGATGTGGAAAGGCACACAGAACACATCTCTAAGAAAGTTGCTGATGTAGTTCGAAATATAAGAGAGATCGAGGAAGAAAAATCAGAGTCAAATGGAAGGTAA 753 0.421 MMDHQSGQGSYGSDLNVMAETSEKHDKVDGNISNNLELCAVEDERFVEQPVADSDIMEPFIGMEFNTREEAREFYNAYGRRIGFTVRVHHNRRSRVNNEVIGQDFVCSKEGYRAKKYVHRKDRVLPPPPPTREGCQAMVRMTLQDGGKWVVTKFEKEHTHKLMSPSEVPWRRSEKHLITEDEKDRRIRALSLELYNERQKNKRRCAAYEEQINMILNDVERHTEHISKKVADVVRNIREIEEEKSESNGR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04402 250 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 244 - -
Trre12g04402 250 Pfam FAR1 DNA-binding domain 73 163 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04402 Trre-Chr12 58645708 58646670 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre12g04402 FAR1 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04402 - - gmx:100810283 392.504