Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04398 ATGAGGGCTGGTGTTGCCCTATTGGACATTCTTCAATCTAAACCTTCCCGGGAATTGTTCAGTATCCTAGATGATGCTAGTGAAAGAACATTTTTATTGGGGACAGCAGTGTCAATGCAAAAACATGTTTTTCATGGAGGGTCTGGAAAAATTGGACTTCAACCCAAAAACATAGTTAAGCGCATAAGCTTCTTGCTAGAACAGATATTGGTTAAGGCATGGCTTGCTGACAAGGATGCTGAAGCACTGAGGTGCCAGAAACAATTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGAAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAGCAGCGGGCTAGGGAACAAAGGCTCAAGTTTGAGGAAGAAACTAAAGAGAATGTTGACAGTACACTGAAGACTCTATCACCAGCAGAATGTTCTTTGGATGCATATGATTTTGAAGCTCAAAATCCAGAGGAGTTTACAAATAACACTCCTTCACGTGTACCTTTTCAATTTCCTGATGTCAATGAAGGAAAAGATGGGGATACTCGATTTGGACATGCTTTTGGATCGGATCAGATTATTGGACAGTCAGAACGTGAACTTGATCATCCGTGCAGAGCAGATGCTAGATGGCAGGAGCCTTCAAAATCCCCTCAACGCACAGTAGTCAGTGATCTGCATACAAACAAGAATCCTCCAATTTTAAATCCTGATGAAGTCATTCAGAGTTATGGAACCCGCAGTGATCAGAGGGTAGATGCTATAGTTAATGCTGGTATAGCATGTAACAGGAAGCCAACACCTGAAATTGACAGGATGGTTTTAAAAACCATAGCAAAGACTGAACCAGACACAATTAATCATGAAGTTTTGATCGGATCTATATCCGTCAATCTTGGAAAATGCAGTCAATCAGAGGGTAATGTGGTGGTATCTCAAGACTTCTCCGTTAAGAATGTGGATAACCAGAATAGTTCTCAGGATAAACCAAAGAAACCTGATTTAGTGAAGAGTGGAAACAATCAAGCAACAGTTAAGACTTCAACACCAGTTAGTCAGTTTGAAACTAAAGATTCATTTCCAGTTCAAAGTCATGGGACAGAAGTTGATGCAGGAAGTAGAGATGAAGGGTGTCAAAACGCGTCAAGGTTGGCTAGTGATGGTAACGATGTTGGTTTTAAAATGAAAATCTCCAATCGCGAGGGTCACTTAGATCCAAGAAAGTTCCAGTTTAATATCCAGGCTGCAAAAGCCTTTCTTGCACAAAGATTGGAAGAAGCTATATCATCGCATCATGTGAAATTGGTTATTTCCCTTGACTCTGAACCTCCTGGGAGCCAGGAGATACAGGATTTGAAGGTAGCAGCAGCATATGGATCTTCTGATGGTGATGATGGAAGCAGCAACATTCCGGCAAAAACAGTTAATAAGTTGCTTTCAACTACCGAAGCTTCTAAGTCCAAACGCAGAGGGAAGTCTAAAAAGGGAATCGATTACAAGAATAATCCTACAGAGAAAATAGCCTAA 1533 0.4116 MRAGVALLDILQSKPSRELFSILDDASERTFLLGTAVSMQKHVFHGGSGKIGLQPKNIVKRISFLLEQILVKAWLADKDAEALRCQKQLVEEEEAAQKRQAEILKRKRQKKLRQKEQRAREQRLKFEEETKENVDSTLKTLSPAECSLDAYDFEAQNPEEFTNNTPSRVPFQFPDVNEGKDGDTRFGHAFGSDQIIGQSERELDHPCRADARWQEPSKSPQRTVVSDLHTNKNPPILNPDEVIQSYGTRSDQRVDAIVNAGIACNRKPTPEIDRMVLKTIAKTEPDTINHEVLIGSISVNLGKCSQSEGNVVVSQDFSVKNVDNQNSSQDKPKKPDLVKSGNNQATVKTSTPVSQFETKDSFPVQSHGTEVDAGSRDEGCQNASRLASDGNDVGFKMKISNREGHLDPRKFQFNIQAAKAFLAQRLEEAISSHHVKLVISLDSEPPGSQEIQDLKVAAAYGSSDGDDGSSNIPAKTVNKLLSTTEASKSKRRGKSKKGIDYKNNPTEKIA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04398 510 Coils Coil 80 132 - -
Trre12g04398 510 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 505 - -
Trre12g04398 510 MobiDBLite consensus disorder prediction 339 365 - -
Trre12g04398 510 MobiDBLite consensus disorder prediction 320 378 - -
Trre12g04398 510 MobiDBLite consensus disorder prediction 464 484 - -
Trre12g04398 510 MobiDBLite consensus disorder prediction 459 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04398 Trre-Chr12 58622524 58625576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04398 1 509 C2H2 Transcription Factor Family AT4G25610 33.398 1.01e-44 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04398 - - tpra:123909032 617.461