Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04396 ATGTCAAAAGATGAATCAAAAGAAGCTTTACAATTAGATTCAAATCCCACCGTTGATTCTTCAGAGAGCCAACCTATTATCATAAATCGTGATGGTAGTGTCACAAGGATCATGAAAATACCAAACACTGAACCCACACAAGACCCAAACAACATTGTTCTCACCAAAGATGTCCCTCTTAACCCTATTAACAAAACTTTCATACGTTTGTTCCTACCTCGTATAGCACTTCACAATTCTAGAAAACTCCCTCTAATTGTTTACTATCATGGAGGTGGTTTTATATTCTTTAGTGCTTCGTCCACGATCAACCATGAGTTTTGCATTAAATTAGCGGAAAAAATTGGTGTTGTGGTTGCATCCGTGGATTACCGTCTTGCGCCAGAACACCGTCTCCCCGCCGCCTATGACGACGCGGTTGAGGCATTACATTGGTTGAGAACAACAAATGAGAAATGGGTGCATCAATTTTGTGATGTGTTCAATTTTTACCTTATGGGATCTAGTGCGGGAGGGAACATTGCGTACCACGCAAGTTTACATGTGGCCAAAACCGTTGATGAAGTTGATTTTGACAAATTTAAGATCAGAGGGTTGATATTGCACCATCCGTTTTTTGGTGGGTCCACGAGGACAAATACAGAGTTGAGACTCGAAAACGATCGAGCTTTGCCTCTTAAGGCGAGTGATCTAATGTGGGAGTTTACATTGCCTGAGGGTGTAGGTAGGGACCATAAGTTTTGCAATCCAATGGTTGTGGATGAAGAAGATGGCGCATGTTTTGATAGAATCAAACGATTGGGATGGAAGATTCTTTTGACGGGTTGTGATGGAGACCCCTTGATTGATCGTCAGGTTGAATTTGTGGAGATGTTGAGAAGCAAAGGGATTGAAATTATGAGTTACTTTGGGGAAGGTTTTCATGGGATGGAATTATTGGAACCAAGGGGAGATGAACCACTATTTGAACAAATAAAAGATTTAATAAATAATTGTATCACATTTGATAAACACTAA 1017 0.4031 MSKDESKEALQLDSNPTVDSSESQPIIINRDGSVTRIMKIPNTEPTQDPNNIVLTKDVPLNPINKTFIRLFLPRIALHNSRKLPLIVYYHGGGFIFFSASSTINHEFCIKLAEKIGVVVASVDYRLAPEHRLPAAYDDAVEALHWLRTTNEKWVHQFCDVFNFYLMGSSAGGNIAYHASLHVAKTVDEVDFDKFKIRGLILHHPFFGGSTRTNTELRLENDRALPLKASDLMWEFTLPEGVGRDHKFCNPMVVDEEDGACFDRIKRLGWKILLTGCDGDPLIDRQVEFVEMLRSKGIEIMSYFGEGFHGMELLEPRGDEPLFEQIKDLINNCITFDKH 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04396 338 MobiDBLite consensus disorder prediction 11 25 - -
Trre12g04396 338 SUPERFAMILY alpha/beta-Hydrolases 23 329 IPR029058 -
Trre12g04396 338 Pfam alpha/beta hydrolase fold 86 302 IPR013094 GO:0016787
Trre12g04396 338 PANTHER ARYLACETAMIDE DEACETYLASE 29 310 - -
Trre12g04396 338 MobiDBLite consensus disorder prediction 1 25 - -
Trre12g04396 338 Gene3D alpha/beta hydrolase 22 335 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04396 Trre-Chr12 58609133 58610149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04396 16 314 Carbohydrate Esterase AT5G16080 36.013 1.62e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04396 - - psat:127130592 500.36