Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04395 ATGGAGAACATGTTTTTGGGTTGCTTGTATCTTTGCTTCATTCAACATACCTTCATTGAGTTGGGCATAATTGCTCTTCATATCAAGCTTCGTGCAATTGGAGGAAACAAGACCAAGACACTAGGCCCTGGTGCTCAAGCTGCTCTCCGTTCTTCGGCACGTTCTGGAATGAAAATTGGCCGCATAGGTGATCATAACATCCTATGA 207 0.4396 MENMFLGCLYLCFIQHTFIELGIIALHIKLRAIGGNKTKTLGPGAQAALRSSARSGMKIGRIGDHNIL 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04395 68 Gene3D Ribosomal protein S11 4 67 IPR036967 GO:0003735|GO:0005840|GO:0006412
Trre12g04395 68 Pfam Ribosomal protein S11 16 64 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04395 Trre-Chr12 58606392 58607028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04395 20 64 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 80.000 5.12e-20 75.9