Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04379 ATGGATCCTGAAAGATCAATAGAGGAGCAATTCTCCAAGCTACATCCTACCTTGCCTGTAAACTTTAGAATTGGAATAGTTGGTGGTGGTCCAAGTGGCATATCAGCTGCTTATGCATTGGCAAGGCTTGGTTATAATAATATCACTGTCTTGGAGAAACACCATGCAGTTGGTGGAATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTTGGTGGGCAAGTTCTGGCTGCAAGCAGTGCTCCTGTCATCTTTCATTTGGCAAAAGAGACAGGTTCTGCACTCGAAGAATTGGACTCCCACAAGCTTGCTGTCATTGACACTTCCTCGGGAAAATACCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGAAAATTCAAGAAAAAGTGAAGAATTCTGGTCGTTTCGGTGTCCATGCTGTCAGTGAATTTACCGCGGACTTAACTCCAGAATATCTTGAGAGTAATGGACTCAAATCAGTTCCTAAATCTGTTGCTTATGGTTACACAGCTTCAGGATATGGATTCATACAAGACATGCCTTATGCTTACATTCATGAATTTACCAGAACGTCCATGGCTGGAAAAATTCGAAGATTTAAAGGTGGATATACAAGTCTTTGGCAGAAGATTGCAGAGTCACTTCCTATAAAGCTTCACTGTAACACTGAAGTGTTAACAATAAGGCGGAATTCTGACAGTGTTTCTGTTAATGTCAAGAGCTCAAATGAAATTGAAACTATGGAATTTGATAAGATCATTGTCTCTGGTAACTTTCCATTAAAATATGGAAGAACTTACAGATCAGTGCATTCAACTTGCATAGATAGTGAAGCAGAAGTGATGGATGCTAGTGACATCGAAAAGGAACTATTCAGCAAAGTAGAGACAAATGACTACTACACCACTGTTTTTAAGATCAAAGGGCTGGATCATATGCCAGTTGGATTTTATTATTTTAATGAATATATGGAAGATCCATGTACGATCGGAAATCCAGTTGCCATGCAGAAGTTTTACGCCAACTCTGATATATTCTTGTTCTGGTCTTATGGCAACTCCTTTGATATCAAGGGACCAACTATCACTGAGCTTGCAATCAAGGCGATAGAAGCCATAGGGGGAGAGGTTGAGAGCTTCATTCTTCAGCGTCGCTTTAAGTATTTCCCTCATGTTAGCAGCCAAGATATGAAAAACGGATTCTATGAAAAGTTGGAATCAGAGCTCCAAGGTTCAAGGAATACTTATTATGTCGGTGGGCTTATGGCATTTGAGCTCACAGAGAGAAATTCATCTTATGCCATGGCTCTTATGTGCAAGAACTTTGCAAATAAAAATGATTTGCCAGTGTTTCCTTATACTAAGAGTTTGTTTCCTTTGCAAACTGAGTTTCAGAGAAAGGAACCTAAACAACTAACTGAATTGCCCGGCGTGCAATTTCCAGATTTGCCGACTTTGAATAGCTATTTAAAGCACTGGGGAACTCATCCAGTCACTCAAGACAGAACCCTTTATAGTTGGATAAATGAAGAAGGGACGGTGATAGGTAAGAGGACATACAGAGAGCAACATTTATATGCTTCTTGCATTGCAAGTAAGCTCTTAAAAAGCCAAAAGCCAGTTATCAAGCCTGGCGACAAGGTTCTTCTAGTCTACGTTCCCGGTCTAGATTTCATTGATGCATTCTTTGCATGCTTAAGAGCTAAAGTCACACCAGTCCCAGTTCTTCCCCCAGATCCCATGCAAAGAGGTGGACAAGCACTTTTGAAAATTGAAAACATTGCCAAGTCATGTGGCATAGTTGCAATTTTATCAACAGTAGCTTATCACTCAGCAGTCCGAGCAGGTTCAGTGAAAAACTTTATCACATTGAAAAATGGGAAATCTTCAGCTCGGTGGCCGAATCTTCCGTGGTTGCACACTGATACTTGGATCAGTAATTCAAGAAGTTCTGCGATGGAGGATTTATACGGTGATCAGTGTGAATCTCAGCCTGCTGATATATGTTTCTTGCAGTTTACTTCAGGCTCGACCGGTGATGCTAAAGGAGTCATGATCACCCATGGAGGTCTAATTCACAATGTAAAGCTGATGCAAAGAAGATACAAGAGTACCTCAAGGACTGTACTAGTGAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGCGGTGGAACTGCCCTTCTGTTTTCACCAATGACGTTCATCAAGAAACCACTCTTATGGATAGAAACCATGAGCAAGTATCAAGCAACTCACAGTGCTGGACCTAACTTTGCTTTCGAGTTAGTAGTTCGAAGGTTAGAGTCTGACAAGGATAAACTTCAGAACCTAGACCTTTCCTCCATGATTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAAAAGACACTGAAAAAATTTCTTGAGCTAACCGGTCCTTATGGCTTCTCTCAAAAGGCGATGGCTCCTGGATACGGCTTAGCAGAGAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGCAATCCTATTCTTGTTGACTGGCAGGGACGAGTTTGTTGTGGATATGTTCATCCAGGGAATGCAGATGTTGACATCAGAATAGTTGACCCAGATGGTGGCGAAGAGCTTCGGGAAGATGGAAAAGAAGGAGAAATCTGGATCAGTAGTCCGAGTGCAGGAATAGGATACTGGGGGAAGGAAGAATTGAGTCAGGCAACTTTTCAAAATCAGCTTCCAAACCATCCTAGACGCTTCTACACAAGAACCGGAGACTTGGGAAGGATAATAGATGGAAAGCTATTCATCACTGGTAGAATCAAAGATCTTATCATTGTTGCTGGAAGAAACATCTATTCCTCAGATGTTGAAAAGACGGTTGAGAGTTCGTCTGAATTTCTCCGTCCAGGATGCTGTGCTGTCATTGGTGTCCCTGAAGACACTTTATCAGCCAAAGGAATTTCCTTGCCAGATGGTTCAGACCAGGTTGGTTTGGTTGTGATTGCAGAACTGAGGGATGGTAAACCAGTTAGCAAGGATGTGGTTGAAGGTATTCAGGCTCGTGTGGCGGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATTAGAAGGTTTGAATGTCTCAAACAGTTTGCAGATGGAACACTGAATCTGGTACCACAACCAGTTCTGACAAAGAAAACACTGATGAGGTCATTCACTACAGGAACATGTAAAGAAGGAAGAACACCCCGGGCACGGCTAGTGAATAGTACACCTATAACTAGTCTGAGAATCAGTAACAAGGAAATTATGGAATTCTTGAAAAGGCTTATTTCTGAGCAGGCTGGAATCTCGGTAAGCAACATCTCTGTCACAGACAACATGTCAACCTATGGAATGGATTCAATCGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTTGGAGTTCCGGTTGCAGCTATCGATGTTTTCAGTGCATCCTGCATTCAAGAATTGGCCAACTTCTCAGAGAATCTTTTGTTGAAGTCACAACCTCACCTTACGAGCAATCCATCCTATGCTCCAGAAGCTGAAACTGAATCTACTGAATTTTTTGTGGAAGTGTCCAACTCTCACAGGTGGAGTATATGTTTACTTCAACTCTTGGCACTTGTTTTCGTTTCTACCCTTCTGGTTTCTCCTGCTTATCTTTCCATAACTACTTTTCAAAATCTCATCACAAGTTTCAGTAAACCAGCATATGGAATTCCTTGGTCAAACTATATATTTTCACTTGCTTTGGCACCACTTTCTTGGATCCTTTGCATTGCTTCTACATGCATTTGCATTTCATTTTTTGGAAATTCTTTCTTGAGGCCAAACTATGCTCTTACTCCTGAAATATCCATCTATTCAATGGCCTTTGTAAAGTGGTGGGCACTTTATAAAAGCCAGGAAATTTCATCCAAAGTTCTGGCTACACACCTCAAAGGAACGGTGTTTCTGAAGTACTGGTTTGAGATGCTAGGTGCAAGAATTGGATCCTCAGTTTTGCTTGATACGGTCGACATCACAGACCCATCTCTAGTTTCAATTGGTGATGAAGCTGTCATTTCTGAAGGGGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGAATTCTAAGTCTCCATCCTATTAGGATCGGCCGAAATTCTTCCATTGGACCTTATGCTGTTATTCAAAAAGGAAGTTTTATTAAAGAAGGAGCTGAGGTACAACCACTACAAAAAGTTGAAGGAGGCCAACATGTTCTCAATCCTACAAAGCTTAATAATATTAAAGAGAATGCAGTGTTACTTGTTACAACCAGCAAAACTGAGTCTAATGCTATATACCATTTTATGGGGATTTATCTTGTTGGTTTTCTAAGTTCCCTTGCTGCAGCTATTACTTACTTCATGTATACATGGTTCTTCCAAAAACCACCTTCAATCCAAAGCTTTTCATTTATTTGCATATGTGGAGCCTTCCATTGGATACCATTTACTATTATAGCATATGCTGCCATGTTTTCTGAAGTTCCATCAAATCCATTTGCCTTTGCCATTTCCTTCGCATGTGCATACTTGCTTCATGGTCTCATACTCACCTCTCTCACATGTTCTTTGACTTATTTACTGAAAATTCAAAAGCAAACACACTTCAAAACCTGGCTTAGAAACCAATTGACCCTTTCCTGCCACCTTAGATTTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCGTATACTTACGCCTTCTCGGAGCCAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAATCCAGTTTCAAATCCCGAGTTAATGTCGATTGGTGATGGTGTTCATCTTGGTGACTTTAGCCGCTTAATCACTGGTTTCAATTATTCCAATGGATATACTTGTGGGAAAATAGAGGTTCAAGATAACTCAGTTGTTGGTAGTCAAAGCCTAATTCTCCCTGGTTCTCTTGTTGAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATACTCCATGAAGGTAGTGTTTACATCGGATCTCAAACCCGAGTTACAATGAGGAACTCAGGAAATGCTAATTTTGATGAAAGAATCGAGGAGATGGACATGGACTACAAGAAGATAGTTGCAAATTTGGCTGCAAATTTAGCTGTAACAACAATGAATGCTAAAGCAAGATATTTTCATCGCATTGGTGTTAGTGGAAAAGGGTACTTGAAAATATACAACAAACTTGAGGGTATTCCGATGCACAAGATTTTTCACCCTGGAAAAAGCTACCCTATCATTGTGAGACATAGTAATAGCTTGAGTGCTGATGATGATGCAAGGATTGATGCGCGAGGTGCTGCTTTGAGGATACTTTCTGATGAACCTGCTACAGATTCTTCTGATTCTCTTCCTCCTACTCTCATTGACTTAACACTAAAAACAGGAAATGCATTTTATGCTCGAACTCTTGCTGATTTTGCAAGTTGGCTTGTGTGTGGACTTGCTGCAAGGGAAGAACTAGTAAAGGGCGCTCCACATGTCCGGGATGCAGTATGGAATTCTCTCAGACATGCTGATTCATATGCCGAATTGCATTACTTCTCAAACTATTCCAGGCTCATGCGGTTTGAAGACGGACAACAAATGTATGTGAAATTCAAGTTAAGGCCTCATGACACAAGCATCCATGAAGACAAAGGTAAAGTTAATCCAACAGGAATTCTTCCACCAGAAACAGGTGCAATCCCTAGAGACGAAAATGATTCACGTCCTTTGCTTTTCCTTGCTAATGATTTTCAAAACCGTGTTAGTTCCTCCAGCGGAGTTTGTTATGTTTTCCAAATTCAAGTAAGACCAGTTCCAGACGATGAACAAGGCCGCGAAATTGCATTGGATTGTACTAAACCATGGGATGAAAATCAATTCCCTTTCATTGATGTCGGAGAGATTAACATCAATGAGAATCTTTCAATGGAAGAGTCACAAAAGCTCGAGTTTAATCCTTACCTTAAAAGCAATGAGCTGGATACAATTTCAGCTACCTCCAGCACACAAAGCGCTTCAATTGATCACGGCCGTTCACTAATCTACGAGATTTGTCAGCACGTCCGCAACAGACAGCCAATCCCAGAAGCTTGGAGAAACCTCGTACAACAATCCAATGTTAAAGTTGACTTATCCTGTTGTCCAATGGCATCAGCAGCAGCACCATTACCCGAAAAAGAACCACTACTGAACAAAGCAACACCGACATTAACATTGACAAGAACATGGTACCAAACATTCTCAGCACTCTTCATTCAGCCATTACTACAAACAGTTTTACCTCACATGGTAATTGCTTTAGCTATTTATGTTCCTCTGAACTTGGTTCTTTATTTTAAGGATGTCAAAAAACTTCCACTACATTGGTTACTTCCATTCTTTTGGATTCTCTCAGGTTTTATAGCTGCATTATCATGTGTTATAGCCAAAAGGGTCCTTGTAGGAAAAAGAAAAACAGGTGAAACAATACCAATATGGAGTAAAAAAATAGTCTTTGATACAACATGGCAAGCAATAAGAACACTAGTTGGTGATTATTTCATGGATATAACAAAAGGGTCATTTTTGTTTATAATTTGGATGAAATTAATGGGTGCAGAGATTGACATGGATGGTACCTATGTAGATAGTAATGGAGCAATGTTGAATCCTGAAATGGTGAAAATTGAAAGAGGTGGTTGTGTTGGAAAAGAAGCATTGTTATTTGGACATATATATGAAGGTGAAGAAGGTGGAATGGTTAAATATGGAGAGATTAAGATTGGTGAAGATGGTTTTGTTGGAAGTAAAGCTGTGGTTATGCCTGGTGTTGAAATTGAGAATGATGCTGATCTTTTTGCTTTGTCTCTTGCTATGAAAGGAGAAATTATTAGGCCAAGATAG 6996 0.4031 MDPERSIEEQFSKLHPTLPVNFRIGIVGGGPSGISAAYALARLGYNNITVLEKHHAVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSALEELDSHKLAVIDTSSGKYQDIKVADDYVSVMSLTLKIQEKVKNSGRFGVHAVSEFTADLTPEYLESNGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPIKLHCNTEVLTIRRNSDSVSVNVKSSNEIETMEFDKIIVSGNFPLKYGRTYRSVHSTCIDSEAEVMDASDIEKELFSKVETNDYYTTVFKIKGLDHMPVGFYYFNEYMEDPCTIGNPVAMQKFYANSDIFLFWSYGNSFDIKGPTITELAIKAIEAIGGEVESFILQRRFKYFPHVSSQDMKNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALMCKNFANKNDLPVFPYTKSLFPLQTEFQRKEPKQLTELPGVQFPDLPTLNSYLKHWGTHPVTQDRTLYSWINEEGTVIGKRTYREQHLYASCIASKLLKSQKPVIKPGDKVLLVYVPGLDFIDAFFACLRAKVTPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGSVKNFITLKNGKSSARWPNLPWLHTDTWISNSRSSAMEDLYGDQCESQPADICFLQFTSGSTGDAKGVMITHGGLIHNVKLMQRRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGTALLFSPMTFIKKPLLWIETMSKYQATHSAGPNFAFELVVRRLESDKDKLQNLDLSSMIFLMVAAEPVRQKTLKKFLELTGPYGFSQKAMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYVHPGNADVDIRIVDPDGGEELREDGKEGEIWISSPSAGIGYWGKEELSQATFQNQLPNHPRRFYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVESSSEFLRPGCCAVIGVPEDTLSAKGISLPDGSDQVGLVVIAELRDGKPVSKDVVEGIQARVAEEHGVNVASVKLIKPRTISKTTSGKIRRFECLKQFADGTLNLVPQPVLTKKTLMRSFTTGTCKEGRTPRARLVNSTPITSLRISNKEIMEFLKRLISEQAGISVSNISVTDNMSTYGMDSIGVVKATQKLSDFLGVPVAAIDVFSASCIQELANFSENLLLKSQPHLTSNPSYAPEAETESTEFFVEVSNSHRWSICLLQLLALVFVSTLLVSPAYLSITTFQNLITSFSKPAYGIPWSNYIFSLALAPLSWILCIASTCICISFFGNSFLRPNYALTPEISIYSMAFVKWWALYKSQEISSKVLATHLKGTVFLKYWFEMLGARIGSSVLLDTVDITDPSLVSIGDEAVISEGVLVQSHEVKNGILSLHPIRIGRNSSIGPYAVIQKGSFIKEGAEVQPLQKVEGGQHVLNPTKLNNIKENAVLLVTTSKTESNAIYHFMGIYLVGFLSSLAAAITYFMYTWFFQKPPSIQSFSFICICGAFHWIPFTIIAYAAMFSEVPSNPFAFAISFACAYLLHGLILTSLTCSLTYLLKIQKQTHFKTWLRNQLTLSCHLRFAKLLSGTEAFCVYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRLITGFNYSNGYTCGKIEVQDNSVVGSQSLILPGSLVEKNVILGALSVAPMNSILHEGSVYIGSQTRVTMRNSGNANFDERIEEMDMDYKKIVANLAANLAVTTMNAKARYFHRIGVSGKGYLKIYNKLEGIPMHKIFHPGKSYPIIVRHSNSLSADDDARIDARGAALRILSDEPATDSSDSLPPTLIDLTLKTGNAFYARTLADFASWLVCGLAAREELVKGAPHVRDAVWNSLRHADSYAELHYFSNYSRLMRFEDGQQMYVKFKLRPHDTSIHEDKGKVNPTGILPPETGAIPRDENDSRPLLFLANDFQNRVSSSSGVCYVFQIQVRPVPDDEQGREIALDCTKPWDENQFPFIDVGEININENLSMEESQKLEFNPYLKSNELDTISATSSTQSASIDHGRSLIYEICQHVRNRQPIPEAWRNLVQQSNVKVDLSCCPMASAAAPLPEKEPLLNKATPTLTLTRTWYQTFSALFIQPLLQTVLPHMVIALAIYVPLNLVLYFKDVKKLPLHWLLPFFWILSGFIAALSCVIAKRVLVGKRKTGETIPIWSKKIVFDTTWQAIRTLVGDYFMDITKGSFLFIIWMKLMGAEIDMDGTYVDSNGAMLNPEMVKIERGGCVGKEALLFGHIYEGEEGGMVKYGEIKIGEDGFVGSKAVVMPGVEIENDADLFALSLAMKGEIIRPR 2331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04379 2331 SUPERFAMILY FAD/NAD(P)-binding domain 21 271 IPR036188 -
Trre12g04379 2331 PRINTS Adrenodoxin reductase family signature 47 60 - -
Trre12g04379 2331 PRINTS Adrenodoxin reductase family signature 23 45 - -
Trre12g04379 2331 Gene3D Catalase core domain 1709 2070 - -
Trre12g04379 2331 ProSitePatterns Phosphopantetheine attachment site. 1149 1164 IPR006162 -
Trre12g04379 2331 SUPERFAMILY Trimeric LpxA-like enzymes 1603 1711 IPR011004 -
Trre12g04379 2331 Gene3D - 23 445 IPR036188 -
Trre12g04379 2331 CDD FAAL 499 1071 IPR040097 GO:0008610
Trre12g04379 2331 ProSiteProfiles catalase family profile. 1682 2331 IPR018028 GO:0004096|GO:0006979|GO:0020037
Trre12g04379 2331 Gene3D Hexapeptide repeat proteins 1330 1439 - -
Trre12g04379 2331 Gene3D - 94 202 - -
Trre12g04379 2331 SMART Phosphopantetheine attachment site 1123 1194 IPR020806 GO:0031177
Trre12g04379 2331 Gene3D - 1112 1193 IPR036736 -
Trre12g04379 2331 Gene3D Hexapeptide repeat proteins 1580 1708 - -
Trre12g04379 2331 Pfam Phosphopantetheine attachment site 1125 1189 IPR009081 -
Trre12g04379 2331 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Trre12g04379 2331 SUPERFAMILY ACP-like 1118 1201 IPR036736 -
Trre12g04379 2331 SUPERFAMILY Trimeric LpxA-like enzymes 1343 1441 IPR011004 -
Trre12g04379 2331 Gene3D - 303 396 - -
Trre12g04379 2331 MobiDBLite consensus disorder prediction 1918 1938 - -
Trre12g04379 2331 SUPERFAMILY Acetyl-CoA synthetase-like 493 1080 - -
Trre12g04379 2331 ProSiteProfiles Carrier protein (CP) domain profile. 1120 1194 IPR009081 -
Trre12g04379 2331 Gene3D - 952 1080 IPR045851 -
Trre12g04379 2331 SUPERFAMILY Trimeric LpxA-like enzymes 2191 2324 IPR011004 -
Trre12g04379 2331 Gene3D - 479 951 IPR042099 -
Trre12g04379 2331 ProSitePatterns Putative AMP-binding domain signature. 679 690 IPR020845 -
Trre12g04379 2331 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 131 2080 - -
Trre12g04379 2331 Pfam AMP-binding enzyme 525 957 IPR000873 -
Trre12g04379 2331 SUPERFAMILY Heme-dependent catalase-like 1687 2061 IPR020835 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04379 Trre-Chr12 58472369 58480556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04379 643 990 Monolignol Biosynthesis Gene Families AT1G20480 26.216 1.87e-21 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04379 - - pcin:129313184 3571.94