Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre12g04378 | ATGGATCCTGAAAGATCAATAGAGGAGCAATTCTCCAAGCTACATCCTACCTTGCCTGTAAACTTTAGAATTGGAATAGTTGGTGGTGGTCCAAGTGGCATATCAGCTGCTTATGCATTGGCAAGGCTTGGTTATAATAATATCACTGTCTTGGAGAAACACCATGCAGTTGGTGGAATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTTGGTGGGCAAGTTCTGGCTGCAAGCAGTGCTCCTGTCATCTTTCATTTGGCAAAAGAGACAGGTTCTGCACTCGAAGAATTGGACTCCCACAAGCTTGCTGTCATTGACACTTCCTCGGGAAAATACCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGAAAATTCAAGAAAAAGTGAAGAATTCTGGTCGTTTCGGTGTCCATGCTGTCAGTGAATTTACCGCGGACTTAACTCCAGAATATCTTGAGAGTAATGGACTCAAATCAGTTCCTAAATCTGTTGCTTATGGTTACACAGCTTCAGGATATGGATTCATACAAGACATGCCTTATGCTTACATTCATGAATTTACCAGAACGTCCATGGCTGGAAAAATTCGAAGATTTAAAGGTGGATATACAAGTCTTTGGCAGAAGATTGCAGAGTCACTTCCTATAAAGCTTCACTGTAACACTGAAGTGTTAACAATAAGGCGGAATTCTGACAGTGTTTCTGTTAATGTCAAGAGCTCAAATGAAATTGAAACTATGGAATTTGATAAGATCATTGTCTCTGGTAACTTTCCATTAAAATATGGAAGAACTTACAGATCAGTGCATTCAACTTGCATAGATAGTGAAGCAGAAGTGATGGATGCTAGTGACATCGAAAAGGAACTATTCAGCAAAGTAGAGACAAATGACTACTACACCACTGTTTTTAAGATCAAAGGGCTGGATCATATGCCAGTTGGATTTTATTATTTTAATGAATATATGGAAGATCCATGTACGATCGGAAATCCAGTTGCCATGCAGAAGTTTTACGCCAACTCTGATATATTCTTGTTCTGGTCTTATGGCAACTCCTTTGATATCAAGGGACCAACTATCACTGAGCTTGCAATCAAGGCGATAGAAGCCATAGGGGGAGAGGTTGAGAGCTTCATTCTTCAGCGTCGCTTTAAGTATTTCCCTCATGTTAGCAGCCAAGATATGAAAAACGGATTCTATGAAAAGTTGGAATCAGAGCTCCAAGGTTCAAGGAATACTTATTATGTCGGTGGGCTTATGGCATTTGAGCTCACAGAGAGAAATTCATCTTATGCCATGGCTCTTATGTGCAAGAACTTTGCAAATAAAAATGATTTGCCAGTGTTTCCTTATACTAAGAGTTTGTTTCCTTTGCAAACTGAGTTTCAGAGAAAGGAACCTAAACAACTAACTGAATTGCCCGGCGTGCAATTTCCAGATTTGCCGACTTTGAATAGCTATTTAAAGCACTGGGGAACTCATCCAGTCACTCAAGACAGAACCCTTTATAGTTGGATAAATGAAGAAGGGACGGTGATAGGTAAGAGGACATACAGAGAGCAACATTTATATGCTTCTTGCATTGCAAGTAAGCTCTTAAAAAGCCAAAAGCCAGTTATCAAGCCTGGCGACAAGGTTCTTCTAGTCTACGTTCCCGGTCTAGATTTCATTGATGCATTCTTTGCATGCTTAAGAGCTAAAGTCACACCAGTCCCAGTTCTTCCCCCAGATCCCATGCAAAGAGGTGGACAAGCACTTTTGAAAATTGAAAACATTGCCAAGTCATGTGGCATAGTTGCAATTTTATCAACAGTAGCTTATCACTCAGCAGTCCGAGCAGGTTCAGTGAAAAACTTTATCACATTGAAAAATGGGAAATCTTCAGCTCGGTGGCCGAATCTTCCGTGGTTGCACACTGATACTTGGATCAGTAATTCAAGAAGTTCTGCGATGGAGGATTTATACGGTGATCAGTGTGAATCTCAGCCTGCTGATATATGTTTCTTGCAGTTTACTTCAGGCTCGACCGGTGATGCTAAAGGAGTCATGATCACCCATGGAGGTCTAATTCACAATGTAAAGCTGATGCAAAGAAGATACAAGAGTACCTCAAGGACTGTACTAGTGAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGCGGTGGAACTGCCCTTCTGTTTTCACCAATGACGTTCATCAAGAAACCACTCTTATGGATAGAAACCATGAGCAAGTATCAAGCAACTCACAGTGCTGGACCTAACTTTGCTTTCGAGTTAGTAGTTCGAAGGTTAGAGTCTGACAAGGATAAACTTCAGAACCTAGACCTTTCCTCCATGATTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAAAAGACACTGAAAAAATTTCTTGAGCTAACCGGTCCTTATGGCTTCTCTCAAAAGGCGATGGCTCCTGGATACGGCTTAGCAGAGAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGCAATCCTATTCTTGTTGACTGGCAGGGACGAGTTTGTTGTGGATATGTTCATCCAGGGAATGCAGATGTTGACATCAGAATAGTTGACCCAGATGGTGGCGAAGAGCTTCGGGAAGATGGAAAAGAAGGAGAAATCTGGATCAGTAGTCCGAGTGCAGGAATAGGATACTGGGGGAAGGAAGAATTGAGTCAGGCAACTTTTCAAAATCAGCTTCCAAACCATCCTAGACGCTTCTACACAAGAACCGGAGACTTGGGAAGGATAATAGATGGAAAGCTATTCATCACTGGTAGAATCAAAGATCTTATCATTGTTGCTGGAAGAAACATCTATTCCTCAGATGTTGAAAAGACGGTTGAGAGTTCGTCTGAATTTCTCCGTCCAGGATGCTGTGCTGTCATTGGTGTCCCTGAAGACACTTTATCAGCCAAAGGAATTTCCTTGCCAGATGGTTCAGACCAGGTTGGTTTGGTTGTGATTGCAGAACTGAGGGATGGTAAACCAGTTAGCAAGGATGTGGTTGAAGGTATTCAGGCTCGTGTGGCGGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATTAGAAGGTTTGAATGTCTCAAACAGTTTGCAGATGGAACACTGAATCTGGTACCACAACCAGTTCTGACAAAGAAAACACTGATGAGGTCATTCACTACAGGAACATGTAAAGAAGGAAGAACACCCCGGGCACGGCTAGTGAATAGTACACCTATAACTAGTCTGAGAATCAGTAACAAGGAAATTATGGAATTCTTGAAAAGGCTTATTTCTGAGCAGGCTGGAATCTCGGTAAGCAACATCTCTGTCACAGACAACATGTCAACCTATGGAATGGATTCAATCGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTTGGAGTTCCGGTTGCAGCTATCGATGTTTTCAGTGCATCCTGCATTCAAGAATTGGCCAACTTCTCAGAGAATCTTTTGTTGAAGTCACAACCTCACCTTACGAGCAATCCATCCTATGCTCCAGAAGCTGAAACTGAATCTACTGAATTTTTTGTGGAAGTGTCCAACTCTCACAGGTGGAGTATATGTTTACTTCAACTCTTGGCACTTGTTTTCGTTTCTACCCTTCTGGTTTCTCCTGCTTATCTTTCCATAACTACTTTTCAAAATCTCATCACAAGTTTCAGTAAACCAGCATATGGAATTCCTTGGTCAAACTATATATTTTCACTTGCTTTGGCACCACTTTCTTGGATCCTTTGCATTGCTTCTACATGCATTTGCATTTCATTTTTTGGAAATTCTTTCTTGAGGCCAAACTATGCTCTTACTCCTGAAATATCCATCTATTCAATGGCCTTTGTAAAGTGGTGGGCACTTTATAAAAGCCAGGAAATTTCATCCAAAGTTCTGGCTACACACCTCAAAGGAACGGTGTTTCTGAAGTACTGGTTTGAGATGCTAGGTGCAAGAATTGGATCCTCAGTTTTGCTTGATACGGTCGACATCACAGACCCATCTCTAGTTTCAATTGGTGATGAAGCTGTCATTTCTGAAGGGGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGAATTCTAAGTCTCCATCCTATTAGGATCGGCCGAAATTCTTCCATTGGACCTTATGCTGTTATTCAAAAAGGAAGTTTTATTAAAGAAGGAGCTGAGGTACAACCACTACAAAAAGTTGAAGGAGGCCAACATGTTCTCAATCCTACAAAGCTTAATAATATTAAAGAGAATGCAGTGTTACTTGTTACAACCAGCAAAACTGAGTCTAATGCTATATACCATTTTATGGGGATTTATCTTGTTGGTTTTCTAAGTTCCCTTGCTGCAGCTATTACTTACTTCATGTATACATGGTTCTTCCAAAAACCACCTTCAATCCAAAGCTTTTCATTTATTTGCATATGTGGAGCCTTCCATTGGATACCATTTACTATTATAGCATATGCTGCCATGTTTTCTGAAGTTCCATCAAATCCATTTGCCTTTGCCATTTCCTTCGCATGTGCATACTTGCTTCATGGTCTCATACTCACCTCTCTCACATGTTCTTTGACTTATTTACTGAAAATTCAAAAGCAAACACACTTCAAAACCTGGCTTAGAAACCAATTGACCCTTTCCTGCCACCTTAGATTTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCGTATACTTACGCCTTCTCGGAGCCAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAATCCAGTTTCAAATCCCGAGTTAATGTCGATTGGTGATGGTGTTCATCTTGGTGACTTTAGCCGCTTAATCACTGGTTTCAATTATTCCAATGGATATACTTGTGGGAAAATAGAGGTTCAAGATAACTCAGTTGTTGGTAGTCAAAGCCTAATTCTCCCTGGTTCTCTTGTTGAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATACTCCATGAAGGTAGTGTTTACATCGGATCTCAAACCCGAGTTACAATGAGGAACTCAGGAAATGCTAATTTTGATGAAAGAATCGAGGAGATGGACATGGACTACAAGAAGATAGTTGCAAATTTGGCTGCAAATTTAGCTGTAACAACAATGAATGCTAAAGCAAGATATTTTCATCGCATTGGTGTTAGTGGAAAAGGGTACTTGAAAATATACAACAAACTTGAGGGTATTCCGATGCACAAGATTTTTCACCCTGGAAAAAGCTACCCTATCATTGTGAGACATAGTAATAGCTTGAGTGCTGATGATGATGCAAGGATTGATGCGCGAGGTGCTGCTTTGAGGATACTTTCTGATGAACCTGCTACAGATTCTTCTGATTCTCTTCCTCCTACTCTCATTGACTTAACACTAAAAACAGGAAATGCATTTTATGCTCGAACTCTTGCTGATTTTGCAAGTTGGCTTGTGTGTGGACTTGCTGCAAGGGAAGAACTAGTAAAGGGCGCTCCACATGTCCGGGATGCAGTATGGAATTCTCTCAGACATGCTGATTCATATGCCGAATTGCATTACTTCTCAAACTATTCCAGGCTCATGCGGTTTGAAGACGGACAACAAATGTATGTGAAATTCAAGTTAAGGCCTCATGACACAAGCATCCATGAAGACAAAGGTAAAGTTAATCCAACAGGAATTCTTCCACCAGAAACAGGTGCAATCCCTAGAGACGAAAATGATTCACGTCCTTTGCTTTTCCTTGCTAATGATTTTCAAAACCGTGTTAGTTCCTCCAGCGGAGTTTGTTATGTTTTCCAAATTCAAGTAAGACCAGTTCCAGACGATGAACAAGGCCGCGAAATTGCATTGGATTGTACTAAACCATGGGATGAAAATCAATTCCCTTTCATTGATGTCGGAGAGATTAACATCAATGAGAATCTTTCAATGGAAGAGTCACAAAAGCTCGAGTTTAATCCTTACCTTAAAAGCAATGAGCTGGATACAATTTCAGCTACCTCCAGCACACAAAGCGCTTCAATTGATCACGGCCGTTCACTAATCTACGAGATTTGTCAGCACGTCCGCAACAGACAGCCAATCCCAGAAGCTTGGAGAAACCTCGTACAACAATCCAATGTTAAAGTTGACTTATCCTGTTGTCCAATGGCATCAGCAGCAGCACCATTACCCGAAAAAGAACCACTACTGAACAAAGCAACACCGACATTAACATTGACAAGAACATGGTACCAAACATTCTCAGCACTCTTCATTCAGCCATTACTACAAACAGTTTTACCTCACATGGTAATTGCTTTAGCTATTTATGTTCCTCTGAACTTGGTTCTTTATTTTAAGGATGTCAAAAAACTTCCACTACATTGGTTACTTCCATTCTTTTGGATTCTCTCAGAGATTGACATGGATGGTACCTATGTAGATAGTAATGGAGCAATGTTGAATCCTGAAATGGTGAAAATTGAAAGAGGTGGTTGTGTTGGAAAAGAAGCATTGTTATTTGGACATATATATGAAGGTGAAGAAGGTGGAATGGTTAAATATGGAGAGATTAAGATTGGTGAAGATGGTTTTGTTGGAAGTAAAGCTGTGGTTATGCCTGGTGTTGAAATTGAGAATGATGCTGATCTTTTTGCTTTGTCTCTTGCTATGAAAGGAGAAATTATTAGGCCAAGATAG | 6792 | 0.4056 | MDPERSIEEQFSKLHPTLPVNFRIGIVGGGPSGISAAYALARLGYNNITVLEKHHAVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSALEELDSHKLAVIDTSSGKYQDIKVADDYVSVMSLTLKIQEKVKNSGRFGVHAVSEFTADLTPEYLESNGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPIKLHCNTEVLTIRRNSDSVSVNVKSSNEIETMEFDKIIVSGNFPLKYGRTYRSVHSTCIDSEAEVMDASDIEKELFSKVETNDYYTTVFKIKGLDHMPVGFYYFNEYMEDPCTIGNPVAMQKFYANSDIFLFWSYGNSFDIKGPTITELAIKAIEAIGGEVESFILQRRFKYFPHVSSQDMKNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALMCKNFANKNDLPVFPYTKSLFPLQTEFQRKEPKQLTELPGVQFPDLPTLNSYLKHWGTHPVTQDRTLYSWINEEGTVIGKRTYREQHLYASCIASKLLKSQKPVIKPGDKVLLVYVPGLDFIDAFFACLRAKVTPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGSVKNFITLKNGKSSARWPNLPWLHTDTWISNSRSSAMEDLYGDQCESQPADICFLQFTSGSTGDAKGVMITHGGLIHNVKLMQRRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGTALLFSPMTFIKKPLLWIETMSKYQATHSAGPNFAFELVVRRLESDKDKLQNLDLSSMIFLMVAAEPVRQKTLKKFLELTGPYGFSQKAMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYVHPGNADVDIRIVDPDGGEELREDGKEGEIWISSPSAGIGYWGKEELSQATFQNQLPNHPRRFYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVESSSEFLRPGCCAVIGVPEDTLSAKGISLPDGSDQVGLVVIAELRDGKPVSKDVVEGIQARVAEEHGVNVASVKLIKPRTISKTTSGKIRRFECLKQFADGTLNLVPQPVLTKKTLMRSFTTGTCKEGRTPRARLVNSTPITSLRISNKEIMEFLKRLISEQAGISVSNISVTDNMSTYGMDSIGVVKATQKLSDFLGVPVAAIDVFSASCIQELANFSENLLLKSQPHLTSNPSYAPEAETESTEFFVEVSNSHRWSICLLQLLALVFVSTLLVSPAYLSITTFQNLITSFSKPAYGIPWSNYIFSLALAPLSWILCIASTCICISFFGNSFLRPNYALTPEISIYSMAFVKWWALYKSQEISSKVLATHLKGTVFLKYWFEMLGARIGSSVLLDTVDITDPSLVSIGDEAVISEGVLVQSHEVKNGILSLHPIRIGRNSSIGPYAVIQKGSFIKEGAEVQPLQKVEGGQHVLNPTKLNNIKENAVLLVTTSKTESNAIYHFMGIYLVGFLSSLAAAITYFMYTWFFQKPPSIQSFSFICICGAFHWIPFTIIAYAAMFSEVPSNPFAFAISFACAYLLHGLILTSLTCSLTYLLKIQKQTHFKTWLRNQLTLSCHLRFAKLLSGTEAFCVYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRLITGFNYSNGYTCGKIEVQDNSVVGSQSLILPGSLVEKNVILGALSVAPMNSILHEGSVYIGSQTRVTMRNSGNANFDERIEEMDMDYKKIVANLAANLAVTTMNAKARYFHRIGVSGKGYLKIYNKLEGIPMHKIFHPGKSYPIIVRHSNSLSADDDARIDARGAALRILSDEPATDSSDSLPPTLIDLTLKTGNAFYARTLADFASWLVCGLAAREELVKGAPHVRDAVWNSLRHADSYAELHYFSNYSRLMRFEDGQQMYVKFKLRPHDTSIHEDKGKVNPTGILPPETGAIPRDENDSRPLLFLANDFQNRVSSSSGVCYVFQIQVRPVPDDEQGREIALDCTKPWDENQFPFIDVGEININENLSMEESQKLEFNPYLKSNELDTISATSSTQSASIDHGRSLIYEICQHVRNRQPIPEAWRNLVQQSNVKVDLSCCPMASAAAPLPEKEPLLNKATPTLTLTRTWYQTFSALFIQPLLQTVLPHMVIALAIYVPLNLVLYFKDVKKLPLHWLLPFFWILSEIDMDGTYVDSNGAMLNPEMVKIERGGCVGKEALLFGHIYEGEEGGMVKYGEIKIGEDGFVGSKAVVMPGVEIENDADLFALSLAMKGEIIRPR | 2263 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre12g04378 | 2263 | SUPERFAMILY | FAD/NAD(P)-binding domain | 21 | 271 | IPR036188 | - | |
| Trre12g04378 | 2263 | SUPERFAMILY | Trimeric LpxA-like enzymes | 1603 | 1711 | IPR011004 | - | |
| Trre12g04378 | 2263 | SUPERFAMILY | ACP-like | 1118 | 1201 | IPR036736 | - | |
| Trre12g04378 | 2263 | Gene3D | Catalase core domain | 1709 | 2070 | - | - | |
| Trre12g04378 | 2263 | Gene3D | - | 23 | 445 | IPR036188 | - | |
| Trre12g04378 | 2263 | Pfam | AMP-binding enzyme | 525 | 957 | IPR000873 | - | |
| Trre12g04378 | 2263 | Pfam | Flavin containing amine oxidoreductase | 32 | 265 | IPR002937 | GO:0016491 | |
| Trre12g04378 | 2263 | Gene3D | - | 479 | 951 | IPR042099 | - | |
| Trre12g04378 | 2263 | Gene3D | Hexapeptide repeat proteins | 1580 | 1708 | - | - | |
| Trre12g04378 | 2263 | ProSitePatterns | Phosphopantetheine attachment site. | 1149 | 1164 | IPR006162 | - |
Showing 1 to 10 of 29 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre12g04378 | - | - | pcin:129313184 | 3368.56 |
Showing 1 to 1 of 1 entries