Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04335 ATGGGAGAGCAACTCCTACATAAAAAATGGGACAAGATTTTCTTCACAGGAAGTGCACGAGTGGGGAAGATTGTTATGACTGCAGCAGTGGAGCATCTTACTCCTGTAACTTTGGAGTTAGGTGGAAAATGTCCAGCATTGGTTGATTCACTTTCATCTTCTTTTGACATAAAGATGGCTGTGAAAAGAATATTGCTGGCAAAGTATGGGTCTTGTGCAGGACAAGCATGCATAGCAATTGATTATGTTCTTGTAGAAAAGAGTTTCAGTTCCACATTGGTGGAATTATTGAAGGAATGGTTTAAGAAAATCTTTGGAGACAACCCAAAAGCATCCCACACCATTGGAAGAATTGTTAATAAAAAACATTGCAACAGAATCAAGAGTCTTCTCAATGAACATAAAGTCAAAGAATCAGTGGTTTTTGGTGGTTCTATGGACGAGGATGACTTATTTATGGAACCAACAATATTACTGGATCCACCACTTGAATCAGCAATCATGACAGAAGAAATCTTTGGGCCCCTACTTCCCATAATCACGCTGGAAAAGATTGAAGATGGTATTGAGTTCATAAAATCAAAGCCTAAACCTCTAGCAATTTATGCCTTCACAAAAAACAAAACTCTGCAGAGCAGAATAGTATCAGAAACATCATCCGGGAGTATTGTATTTAACGATGCAATTCTACAGTATGCAGCGGATACCCTCCCATTTGGAGGAATTGGTGAAAGTGGATTTGGCAAGTATCATGGTAAATTCTCCTTTGACGCATTCAGTCACCATAAGGCTGTGGCTAGGAGAAGTTACTACACTGATTTTTGGTTCAGGTTTCCTCCATGGAATCATAACAAGTTCCAACTACTTGAAGAAGCTTATAATTTAAACTATATTGGAATACTTCTTGTCATACTCGGCTTAAAGAAATCAAAACGCTCATTATATATGGCTTGTAATTGA 960 0.3812 MGEQLLHKKWDKIFFTGSARVGKIVMTAAVEHLTPVTLELGGKCPALVDSLSSSFDIKMAVKRILLAKYGSCAGQACIAIDYVLVEKSFSSTLVELLKEWFKKIFGDNPKASHTIGRIVNKKHCNRIKSLLNEHKVKESVVFGGSMDEDDLFMEPTILLDPPLESAIMTEEIFGPLLPIITLEKIEDGIEFIKSKPKPLAIYAFTKNKTLQSRIVSETSSGSIVFNDAILQYAADTLPFGGIGESGFGKYHGKFSFDAFSHHKAVARRSYYTDFWFRFPPWNHNKFQLLEEAYNLNYIGILLVILGLKKSKRSLYMACN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04335 319 SUPERFAMILY ALDH-like 2 282 IPR016161 GO:0016491
Trre12g04335 319 Pfam Aldehyde dehydrogenase family 7 265 IPR015590 GO:0016491
Trre12g04335 319 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 42 245 IPR016163 GO:0016620
Trre12g04335 319 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 263 IPR016162 GO:0016491
Trre12g04335 319 PANTHER ALDEHYDE DEHYDROGENASE 3 305 IPR012394 GO:0006081
Trre12g04335 319 FunFam Aldehyde dehydrogenase 42 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04335 Trre-Chr12 58143578 58147856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04335 5 309 Aldehyde Dehydrogenase Gene Family AT4G36250 57.705 7.25e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04335 K00128 - gmx:100798020 509.22