Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04301 ATGGCTTCCTCCAAAACCAAAACCCTAAAGTCAACGTTCCTTCTTTTATGTCTCTTAGCTTCCTTCATTTATCCAATCAATTCCCATGGAGGAGGACATGATGATTCCGATACCGACCACGATTCTTCCGATTCCGATTCCGAAAACATAAACATACGTTCAAAGAGTTTAATCCTTATCAAAATATGGTGTTTAATCATCTTATTTGTATCCACTTTCTTAGGTGGTGTATCTCCTTATTATTTCCGATGGAATGAGGTTTTTCTTCTCTTAGGGACACAATTTGCTGGTGGTGTTTTTCTTGGAACATCTTTGATGCATTTCTTGAGTGATTCAAATGAAACTTTTGGAGATCTTACAACAAAAACTTACCCTTTTGCTTTCATGTTAGCTTGTTCTGGATATCTTTTAACTATGTTTGGTGATTGTGTGGTGGTTTATGTGACAAGTAATAGTCAAAGAGAAGCTAAAGTTGAGGAACTTGAAGGAGGGAGAACACCTCAAGAAGGAGATGGAACTAATGAGTTAGCTATGGATGAGAGCAACGTTGCATTCATGAAGACTTCTAATGTGGGAGATACTATTTTGCTTATTCTTGCACTTTGTTTTCATTCGGTTTTTGAAGGCATAGCTGTTGGAGTTTCAGGTACTAAAGCGGAAGCATGGAGGAATTTATGGACAATATCATTACACAAAATATTTGCTGCAATAGCAATGGGAATTGCATTACTTAGAATGTTACCAAAAAGACCATTAGTAACAACAGCAGCATATTCATTTGCATTTGGTATCTCAAGTCCAATTGGTGTAGGAATTGGAATTGCAATTGATGCAACAACAGAAGGTAAAACAGCTGATTGGATGTATGCAATATCAATGGGAATTGCTTGTGGTGTTTTTGTCTATGTTGCTATCAATCATTTAATGTCTAAAGGGTTCAAACCTCAAAGGAAGAGCAATTTTGACACTCCTTGGTTTAAGTTTCTAGCTGTGCTTTTTGGTGTTGCTGTTATTGCAGTTGTCATGATTTGGGACTAA 1038 0.368 MASSKTKTLKSTFLLLCLLASFIYPINSHGGGHDDSDTDHDSSDSDSENINIRSKSLILIKIWCLIILFVSTFLGGVSPYYFRWNEVFLLLGTQFAGGVFLGTSLMHFLSDSNETFGDLTTKTYPFAFMLACSGYLLTMFGDCVVVYVTSNSQREAKVEELEGGRTPQEGDGTNELAMDESNVAFMKTSNVGDTILLILALCFHSVFEGIAVGVSGTKAEAWRNLWTISLHKIFAAIAMGIALLRMLPKRPLVTTAAYSFAFGISSPIGVGIGIAIDATTEGKTADWMYAISMGIACGVFVYVAINHLMSKGFKPQRKSNFDTPWFKFLAVLFGVAVIAVVMIWD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04301 345 PANTHER ZINC/IRON TRANSPORTER 60 340 - -
Trre12g04301 345 Pfam ZIP Zinc transporter 59 341 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04301 Trre-Chr12 57911315 57913770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04301 25 345 Inorganic Solute Cotransporters AT1G55910 56.798 1.99e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04301 K14709 - gmx:100791492 477.248