Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04295 ATGCTTACCACAAACACCTTTCTGCAAGATTTCAGTGTTCCTGACACAGTAACAAATGGATTTGAGTTGGAAGATTCATCTTCATCCCCTTCTTCTGTCACAATCTCATATGGAGATTATGAACACACAAGATATTCCAACAGCATCCTAGGATACATAACTGACATCCTCATGGATGAAGAATATGAGTTAGAGAACAAACCTTGTATGTTGCAGGAATGTTTAAGACTTCAAGCTGCTGAAAAATCATTCTATGATGTTCTTGGTCAAACCTATCCTAATAATTCATCATGTGATGATTCCACTGATCCAGATGGAAATTTCGGCCGCGCCGCTAGTTTTGAGAGCAAAAGCAGCAGCTGTACTACTGATAACTCATATGAGTCTGATTGGATCAACCTTGTTGGAGAATCTGACTCTTATTCCTTACAACTACAAACCCCTTTTGTAGAACAAATCTACTCTGATTTGACAGAACCTGATCCAATGGTAATTCAGCAACAAGCTGCTAACCATTTTCAGAATGGAACTTGGAGTTGGAATGACATTCAGCCAGTGATGGTTGAAGAGATTTCAGCTTCAATAGCACCAAGAGAAAAGAGAAGTTATAAGATAAATGATGATGAATCTTGTATTGAACAAGAGGGAAGAGGTAGCAAGATTTCAGCTATCTTTTCTGATGAATTAGAGCCACCAGAGATTTTAGATGAGGTACTGCTTTATCAGTCAGGAAGGAGTAAAAACCAACAACCATCGCAGAATCTCGATTCCGGAGGAAAGTCAAAGGCAACGCGTTCGCGGCCAAAGAAAGTATCTAATAGCAATGCCACAGCTGTGGATTTGTGGACCATGCTAACTCAATGTGCGCAGGCTGTCGCGAGCTACGATCAAAGGAATACAAATGAGCTACTCAAGCAGATTAGGCAACATTCTTCGCAATTTGGGGATGGACTCCAGCGTTTAGCTTATTACTTTGCCAATGGTCTTGAGATAAGATTGGCTGCCGAGACACCATCGTATAAGCCACTTGATGTGGCTACTGCTGGAGATATGTTGAAAGCGTACAAACTATTCGTTACCTCGTCTCCTTTGCAGAGAATGACAAATATGTTGTTAACCAATACGATTATCAGAGTAGTGAAGAACGAGAGCAGCTTTCACATTATCGATTTTGGAATTTGCTATGGTTTCCAATGGCCTTGCCTCATCAAAAGACTTTCATTAAGACCCGGTGGTCCTCCAAAGCTACGAATTACGGGAATTGATCTTCCTCAGGCAGGATTTAGGCCTGCAGAGAGGGTGGAGGAAACCGGTCGGCGTTTAGAAAACTTCTGCAAGAAGTTCAATGTACCATTTGAATACAACTGCATTGCACAAAAATTTGAAACAATCCGGCTCGAGGATCTAAAGATAGACAAGAATGAAATAACTCTTGTGAGCTGTTTATACAGACTGAAGAACCTGCCTGATGAAACGGTTGCAGACAATTGTCCAAGAGAAGCTTTGTTGAAGCTGATCAGGAAGATTAATCCAAAAATCTTCTTCCACGGAGTTGTCAATGGAAGTTATAGTGCACCGTTTTTCCTGACTCGGTTTAGGGAAGCACTATACCACTTCTCATCATTGTTTGATATGTTTGAGGCTAATGTGCCTCGCGAAGACCCGCAGAGGTTGACGCTTGAGAGTGGATTGTTTGGTAGGGATGCCATAAATGTTATAGCTTGTGAAGGTGCAGAGAGAGTTGAAAGGCCTGAGACCTACAAGCAATGGCAGATCAGGAACAGAAGAGCTGGGTTGAAGCAAATCAGGTTGGATTCAGAGTTAGTGAATGAAACCAAAGCAATGGTGAAGAAGGAATACCATAAAGATTTTGTAGTTGATGAGGATGGTAAGTGGATTTTACAAGGATGGAAAGGGAGAATTTTGAATGCTTTATCTGCTTGGGTTCCTGCTTAA 1956 0.4141 MLTTNTFLQDFSVPDTVTNGFELEDSSSSPSSVTISYGDYEHTRYSNSILGYITDILMDEEYELENKPCMLQECLRLQAAEKSFYDVLGQTYPNNSSCDDSTDPDGNFGRAASFESKSSSCTTDNSYESDWINLVGESDSYSLQLQTPFVEQIYSDLTEPDPMVIQQQAANHFQNGTWSWNDIQPVMVEEISASIAPREKRSYKINDDESCIEQEGRGSKISAIFSDELEPPEILDEVLLYQSGRSKNQQPSQNLDSGGKSKATRSRPKKVSNSNATAVDLWTMLTQCAQAVASYDQRNTNELLKQIRQHSSQFGDGLQRLAYYFANGLEIRLAAETPSYKPLDVATAGDMLKAYKLFVTSSPLQRMTNMLLTNTIIRVVKNESSFHIIDFGICYGFQWPCLIKRLSLRPGGPPKLRITGIDLPQAGFRPAERVEETGRRLENFCKKFNVPFEYNCIAQKFETIRLEDLKIDKNEITLVSCLYRLKNLPDETVADNCPREALLKLIRKINPKIFFHGVVNGSYSAPFFLTRFREALYHFSSLFDMFEANVPREDPQRLTLESGLFGRDAINVIACEGAERVERPETYKQWQIRNRRAGLKQIRLDSELVNETKAMVKKEYHKDFVVDEDGKWILQGWKGRILNALSAWVPA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04295 651 ProSiteProfiles GRAS family profile. 272 649 IPR005202 -
Trre12g04295 651 MobiDBLite consensus disorder prediction 245 261 - -
Trre12g04295 651 MobiDBLite consensus disorder prediction 245 274 - -
Trre12g04295 651 Pfam GRAS domain family 283 648 IPR005202 -
Trre12g04295 651 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 227 642 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04295 Trre-Chr12 57860326 57862281 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04295 45 650 GRAS Transcription Factor Family AT2G29060 43.485 1.08e-168 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre12g04295 GRAS 3.5e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04295 - - cam:101504630 1015.37