Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04269 ATGGGAAAACACTTGATTAATTCAGAGGAATCCACTCAAGTTCAAGAAATTAATCAAGGATGCATGTGGGGCATGTTTAATATTCTTGATTACCATCAATGGGGTGTCAAAAGGGTGTTTCATCATAAAAAGAAAAGACATGACAGATATAAGAGAAAGACCACTTTGCAGCAAGAGCAACAAAAGGTAGTTACAGAAGCAGAATCCATTTTGGTCAGTCAACAACATAGAGAAATATCAAATGCTAAAGGTCAAACTAGTAGTGAGAATGCACTTCATCAGAAGAAAGATGGAAATACAACAGAAAGTTCCCTTAAAAGAGACATTTCAATTAAATATAAGAACAGTGACGATGTTTTGGAGATAATTAGTGTGGAGAAGAATTTGTTACTCAAATTTCTAAGAGATATAGACTTTGGTGGTAAAAAAAATCATCAAGCAAGATTGACAAAATCAGGATCATTTCCTTTGCCTGCATCTTCTAAGACGAAAGACATTAGCTCTAGTACCTTCCGATCCAAGCAAACTGAAATTTGGAACTTCCCTAAGGGAGAAAAGTTGCGTGCCGGCACTCAGGTACCGAAGAAGTTTGGATCAAGTTCAGTGAAAGATATTTCATATGAAACGCCGAAGCCTTCCGCGACTGGTAATGGAATCGATAGTGTCATTGCCGTGGAACAAAAATCGATCATTTCTTCGAGGTCTTCTGAAGGATTAAACCACAAAGGATGGAATCAAGTGGTTATTCATCAATTCAAAGTTATAAAACAGAAGATAAAACATGCAATTGTGGAATTGAAAAAAAGTGGTCACAATAAAGCTTCACCTGAATACAGCATCATTGATAATGAGAAAGAGATCTTGCAAAGTTTAGACGATGGCACGATTCATGAATACAAAAAGAGTAGAAGCTTGAGTGAGACTAAAGTTTCTGAAGCTCGCCTAATGCGAAGGACGTCTTCTCTTAACGAATCGATGGATAGATATACTCAGTTGTTTGAGAAAAGTTTAAGCAAAGAGGTTAAGTGGAAAAGCTCAAAGTCTAAGAGTTTAAGATTGACAAATGACGATAAGACTCAAAAGAGTAGGCATGCTCGTATGTTTTCCAGAAGCAATTTGTCTATGCCTAATCTCGAGGCATTAGGATTCATTCTACATGAAGCTCTTCTGGAAACAAATGATATGGGAAATAATACAGTGGAAAGTGATAATGATGTTCAAAGTAAATCAGCGAGCCTTCCTTTAAAGATCGATGAATCAACTGATCATTTTAAAGAGGCTGAAATTGATGAAACAGTTGAAGGAAATGGACGAGATGCGAATCGTAGTCCTAGTTCTTTATCTGATAAGACGGTAAAGAAAATTGATGAAGGAGTTATCTTTGAACAAAGGGAGAACATAAACGAGCCAGCCTCAGAACAAGAAGGAAAAGAATCGAATACACGAAGCTCAAATGCTAGTCTAACAGTCGCCGAAGACACAAACAAGAGTCTTGAAAATCATTTCTTGCACTTCAAGTCATATTCAGAAACCGATTCAAATTTCAAATATGTGAAAGATATTCTTGAATATTCGGGTTTCACGAGAAATGAGCAGACTCAAATGCGATACACGGTAGACCAGCCAATAAAACCATCGTTATTCACAGCATTGGAAGAATCTTTACTTCATGAAAACGAGTATTCCGGTGAAGAGAATACCAACACATGTGATCGCCAACTTCTATTTAACTTGATTAACGGGGTACTCTTTCAAATGTACGAAAACTCACCAACTTACTTTCCCAGACCATTCGCCTTCAACTACAAACTCAAATCAATGCCTAAAGGGAACTATCTTGTTAATGAAGTATGGAACAATGTTAGTTCATATTTGAGTTTGAGACCAGAGTTAGATGAGACATTAGATGATGTTGTCGGTCGCGATTTGACAAAGGGAACCGGTTGGATGAATCTTCAACAGGAAGAGGAATGTGTAGCACTTGAACTAGAGGAAATGATCATAGATGATTTATTAGATGAAATTATCTTCTCTTGA 2037 0.3692 MGKHLINSEESTQVQEINQGCMWGMFNILDYHQWGVKRVFHHKKKRHDRYKRKTTLQQEQQKVVTEAESILVSQQHREISNAKGQTSSENALHQKKDGNTTESSLKRDISIKYKNSDDVLEIISVEKNLLLKFLRDIDFGGKKNHQARLTKSGSFPLPASSKTKDISSSTFRSKQTEIWNFPKGEKLRAGTQVPKKFGSSSVKDISYETPKPSATGNGIDSVIAVEQKSIISSRSSEGLNHKGWNQVVIHQFKVIKQKIKHAIVELKKSGHNKASPEYSIIDNEKEILQSLDDGTIHEYKKSRSLSETKVSEARLMRRTSSLNESMDRYTQLFEKSLSKEVKWKSSKSKSLRLTNDDKTQKSRHARMFSRSNLSMPNLEALGFILHEALLETNDMGNNTVESDNDVQSKSASLPLKIDESTDHFKEAEIDETVEGNGRDANRSPSSLSDKTVKKIDEGVIFEQRENINEPASEQEGKESNTRSSNASLTVAEDTNKSLENHFLHFKSYSETDSNFKYVKDILEYSGFTRNEQTQMRYTVDQPIKPSLFTALEESLLHENEYSGEENTNTCDRQLLFNLINGVLFQMYENSPTYFPRPFAFNYKLKSMPKGNYLVNEVWNNVSSYLSLRPELDETLDDVVGRDLTKGTGWMNLQQEEECVALELEEMIIDDLLDEIIFS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04269 678 Pfam Domain of unknown function (DUF4378) 515 674 IPR025486 -
Trre12g04269 678 MobiDBLite consensus disorder prediction 428 487 - -
Trre12g04269 678 PANTHER PROTEIN TRM32 114 678 IPR044257 -
Trre12g04269 678 MobiDBLite consensus disorder prediction 75 94 - -
Trre12g04269 678 MobiDBLite consensus disorder prediction 449 476 - -
Trre12g04269 678 MobiDBLite consensus disorder prediction 75 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04269 Trre-Chr12 57689316 57692280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04269 118 668 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.183 2.54e-42 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04269 - - cam:101509220 823.928