Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04207 ATGTCAAAATCAAAACCTAGAACCTTCTTTTTCTTCAAACCATCACCACCACCACAATCATCACAATTACCACCTTCTTCACCTCTTAACAAAACCTTCTCCGACGCAATTATTGACGAAAATATCGAAACCGCACACTCTCTCATAACCAAATGGAACTCTATTTCCACAACTTCAAACCATTCTCAATATCTTTTCAACAACACTGAAGAAGCCAAACACTACCTTAAAGCCGTTAAGAGACTACAATCTGCTATGCAGTACCTCGTCGCACAGGATTCCACCTCCAAGAAACTCATTGAAGCACAGTCCTTAATGAAACTCGCCATGAGGAATCTCGAAACAGAATTCTATAGAATTTTAGGACAAAACAGAGACCGGTTCAACTCTGAATCGGTCTCCGTTCTCTCTCGCTCTTCCACCGATCGTCGGAGTAGTTTCTCCGACGATGAATTCTCTGATGAAGAATCGCCATCGCTCTCCGCTGAATCGGTATCAATGACTGCTATAGCTGATTTGAAAGCAATTGCAGAATGCATGATTTTCACCGGTTATAGCAAAGAGTGTGTTAATATTTACGTAATTGTGAGAAAATCGATTGTGGATGAAGCACTTTACAATCTCGGAGTTGAGAAACTGAGTTTCTCTCAGATTCAGAAGATGGATTGGGAAGTTCTTGAATGGAAGATAAAGACCTGGTTAAACGCCGTTAAAGTCGCCGTTAATACTCTGTTTCACGGCGAGAGAACACTCTGTGACTACATTTTTGAATCACCGGAGAAGAAAATCGCCGATTCATGTTTCACCGAGATTTGCAAAGACGGTGCTATGATGCTGTTTACTTTCCCGGAAAACGTCGCAAAATGCAAGAAAACACCGGAGAAACTGTTCAGAACGTTGGATTTATACGAAGCGATTTCCGAAAATTGGCAACAAATCGAATCAATCTTTTCATCGGAATCAAATTCCACGATCCGTTCTCAGGTGATTGCATCACAGGTGAGACTCGGTGAAACCGTTAGAACAATGCTAACTGATTTCGAATCGGCGATTCAGAAAGAGTCTTCCAAGGTTCCGGTACCAGGCGGAGGAATTCATCCTTTAACACGCTACGTCATGAATTACATCGCACTTCTCTCCGATTACGGCGACGCAATCGCCGATATAGTTTTCGATTGGCCACAATCACCGTTACCGGAATCTTATTACAAAAATCCATCTCACGATGAGAATAATCCACCGTCGGAGATAGCAAAACGGTTATCGTGGCTAATTCTTGTTGTTCTCTGTAAACTCGACGGAAAAGCTGAACTATACAAAGACGTTGCACTTTCGTATCTTTTTCTTGCGAATAACATGCAATACGTCGTCGTAAAGGTTCGTAAATCGAATCTAGGGTTTATTCTCGGCGAGGATTGGTTACTGAAACACGAAATGAAAGTGAAAGAGTACGTTACGAAATACGAACGCATGGCGTGGAGTAAGGTTGTGTCGTCGATTCCGGAGAATCCAACGGCTGAGAATGCGAGTGGAATCTTCCAGAATTTCAACGTGGCGTTTGAAGAAGTCTTTAGAACACAGTATTTATGGGTCGTACCCGACCCGAAATTGAGAGAGGAAATTGGAACGTGGCTAGATTTGAATGTTGTTTACAAGTACAGGGAGTTCTATGTGAAGTATCGGGTCGGGTTGGATTCGGTTATAAGATATTCTCCCGAAGATTTGAGGAATTATCTATCGGAGATTTTGTGTGGTAGCGTTTCGTCGCATTCTCCTGATCGGTGA 1785 0.4241 MSKSKPRTFFFFKPSPPPQSSQLPPSSPLNKTFSDAIIDENIETAHSLITKWNSISTTSNHSQYLFNNTEEAKHYLKAVKRLQSAMQYLVAQDSTSKKLIEAQSLMKLAMRNLETEFYRILGQNRDRFNSESVSVLSRSSTDRRSSFSDDEFSDEESPSLSAESVSMTAIADLKAIAECMIFTGYSKECVNIYVIVRKSIVDEALYNLGVEKLSFSQIQKMDWEVLEWKIKTWLNAVKVAVNTLFHGERTLCDYIFESPEKKIADSCFTEICKDGAMMLFTFPENVAKCKKTPEKLFRTLDLYEAISENWQQIESIFSSESNSTIRSQVIASQVRLGETVRTMLTDFESAIQKESSKVPVPGGGIHPLTRYVMNYIALLSDYGDAIADIVFDWPQSPLPESYYKNPSHDENNPPSEIAKRLSWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRKSNLGFILGEDWLLKHEMKVKEYVTKYERMAWSKVVSSIPENPTAENASGIFQNFNVAFEEVFRTQYLWVVPDPKLREEIGTWLDLNVVYKYREFYVKYRVGLDSVIRYSPEDLRNYLSEILCGSVSSHSPDR 594
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04207 594 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 576 IPR004140 GO:0000145|GO:0006887
Trre12g04207 594 SUPERFAMILY Cullin repeat-like 55 582 IPR016159 -
Trre12g04207 594 Gene3D Exocyst complex component Exo70 48 591 - -
Trre12g04207 594 MobiDBLite consensus disorder prediction 1 30 - -
Trre12g04207 594 Pfam Exo70 exocyst complex subunit 232 581 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre12g04207 Trre-Chr12 57155547 57157331 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04207 11 586 EXO70 exocyst subunit family AT5G59730 48.764 0.0 533
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04207 K07195 - gmx:100801773 729.939