Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04096 ATGGAGAAGCAGAGAAAAGAGGCTTCCGAGCTTCAGGCTTTGAACAGGATACTTGCAGCAATGAACAAACTGTTGACAGAGGAAAATAATCGGATGCAGAAAGAGGTTTCACAGCTGGTGAATGAGAACGAATTTATGCGCCAGCAAGTGAACACTATCACAGATACTGCAAGTGCTGATGGTAGTGGCATAGCTTCTTTTGGAGGCGCCTATTAG 216 0.4491 MEKQRKEASELQALNRILAAMNKLLTEENNRMQKEVSQLVNENEFMRQQVNTITDTASADGSGIASFGGAY 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04096 71 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 2 61 IPR044830 GO:0003700
Trre12g04096 71 Coils Coil 11 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04096 Trre-Chr12 56226582 56226952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04096 2 60 Homeobox Transcription Factor Family AT5G60690 61.017 7.11e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04096 K09338 - psat:127095776 85.1149