Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre12g03940 | ATGTTTTCTCTTGAGAGTTGGAGTGATAAACTAAGTGTGCATTCATTTAGGGTGAATGAAAAGAGTGACATTTATAGCTTTGGTGTAGTGATTTTGGAATTGGTAACCGGAAAACATCCTATTGATCAAGAATATGGAGAAAAAGATTTGGTAAAATGGGTTTCTTCCAAATTGAATGAGGAAGGACATGATCAAGTGATTGATCCAACTCTTGATTCTAAGTATAAGGAAGAAATAAGCAAAGTACTCAGCTTGGGGATTCTTTGCACAAGCTCACTTCCTATAAACCGTCTTTCAATGAGAAGTGTAGTGAAAATGCTGGAAGAAGTAACAGCAGTTGCTAAATCTAGAAGTGGAAAATTCTCTCCTTATTACAAGAAGTAG | 384 | 0.3568 | MFSLESWSDKLSVHSFRVNEKSDIYSFGVVILELVTGKHPIDQEYGEKDLVKWVSSKLNEEGHDQVIDPTLDSKYKEEISKVLSLGILCTSSLPINRLSMRSVVKMLEEVTAVAKSRSGKFSPYYKK | 127 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre12g03940 | 127 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 15 | 110 | - | - | |
Trre12g03940 | 127 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 108 | IPR011009 | - | |
Trre12g03940 | 127 | Pfam | Protein tyrosine and serine/threonine kinase | 12 | 57 | IPR001245 | GO:0004672|GO:0006468 | |
Trre12g03940 | 127 | Gene3D | Transferase(Phosphotransferase) domain 1 | 5 | 122 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre12g03940 | Trre-Chr12 | 55042576 | 55042959 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre12g03940 | 13 | 127 | Receptor kinase-like Gene Family | AT1G28440 | 59.350 | 7.05e-44 | 150 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Trre12g03940 | PK_Tyr_Ser-Thr | 1.1e-05 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre12g03940 | - | - | gmx:100778128 | 162.54 |