Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03864 ATGAAGAAGAATAGAAAGAGGAAGAAGACCTGTGACTATCTTTTCCTTGATCTTGGAATCTGGGTTTTCAATAATCCTCCGCCCTTTCACCTCTTTATTATTTGTGGTGATGTGAGCATCAATGGCTTATCGATGTTGCACGACTTAAGAATGAGTAACTACAATATCTTGGTTGCATGTCCAGGAAGGACTTATGATGTTCTCCGCAGTGCAACAACTATAATGTGGCATTGGTCTTCGATTCTCAAAGGGGAAGATCTTACTGGAAAACATTTTAACTATCCTCCTGATGGACCGTTTGATTCGTGGTATGGAGATTCGAGGGTGAATCTTGAAAACCCCTTCTCAGCTGCTGACGGGTCCACATCCTCACAAGCGGAGATACTCGAATACATAGAGTCAGGTGAATTGTCAAAGGTGACTCTTGAAAACCCCTTCTCAACTGCTGAGGAGTCCACGTATTCACAAAATGCGGAGATCCATGAACCTTCCTCGGACATACAATCAAGTGAAGTTCCAGAGTCAGTTTCTAGACAAGTTAAGAATAATAAGCAGAGGGATAGTACCTCAACTCAAAAGCGTATTGACACAAGGAGAATTTTAGCATGGAAAACCTTCTCAATGTAA 627 0.4179 MKKNRKRKKTCDYLFLDLGIWVFNNPPPFHLFIICGDVSINGLSMLHDLRMSNYNILVACPGRTYDVLRSATTIMWHWSSILKGEDLTGKHFNYPPDGPFDSWYGDSRVNLENPFSAADGSTSSQAEILEYIESGELSKVTLENPFSTAEESTYSQNAEIHEPSSDIQSSEVPESVSRQVKNNKQRDSTSTQKRIDTRRILAWKTFSM 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03864 208 MobiDBLite consensus disorder prediction 148 194 - -
Trre12g03864 208 MobiDBLite consensus disorder prediction 148 186 - -
Trre12g03864 208 PANTHER LIMKAIN B LKAP 16 171 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03864 Trre-Chr12 54434466 54435092 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03864 14 84 C2H2 Transcription Factor Family AT5G61190 36.620 2.67e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03864 - - mtr:11420708 168.703