Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03839 ATGGCCAACGGATTGGAAAAAGAAAGTGGGTTCACAATGTTCAGTGATGATGAGCTAAAAGATGTTAATGGGGTGAAGAAAGTTGGAGAATTTGTTGAAGTAATTCATAGATATGGTGATGCTGTTGGAAAGCTTAAGATTTTTGTTAATGGTTACCTTGAAATCACTTGTGAATGTACACCTGGTTGTGAAGAAGACAAATTGACTCCCGCTGCGTTCGAGAAACACTCTGGAAGAGAGACAGCTAGGAAATGGAAGAACAATATATGGGTAATAGTGAATGGTGAGAAGGTTCCATTGTATAAAACAGTTTTGCTCAAATACTATAACCAAGCATTAAAAACAGCCAATGGATCCCACAAATCCCAAAATGGGCAGGTGTGCCACCGTGACGAGTTTATTCGCTGTACTAGATGTAACAAAGAGCGTAGGTTCCGCTTGAGAACAAAAGAGGATTGCCGCCTTCACCATGATGCTTTGGCTGATCCAAATTGGAAATGTTCTGATCTTCCATATGACAAAATTACATGTGACGACGAAGAAGAAAGAGGTAGTCGCAGAGTTTACAGAGGATGCACTCGTTCTCCGGCATGCAAAGGTTGCACTTCTTGTGTGTGCTTCGGTTGTGATATATGCCGTTTTTCGGACTGCAATTGCCAGACTTGTACTGACTTTACAAGGAATGCCAATGCCAAAGCTTGA 702 0.4145 MANGLEKESGFTMFSDDELKDVNGVKKVGEFVEVIHRYGDAVGKLKIFVNGYLEITCECTPGCEEDKLTPAAFEKHSGRETARKWKNNIWVIVNGEKVPLYKTVLLKYYNQALKTANGSHKSQNGQVCHRDEFIRCTRCNKERRFRLRTKEDCRLHHDALADPNWKCSDLPYDKITCDDEEERGSRRVYRGCTRSPACKGCTSCVCFGCDICRFSDCNCQTCTDFTRNANAKA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03839 233 PANTHER PROTEIN ULTRAPETALA 1 10 230 IPR020533 -
Trre12g03839 233 Gene3D - 39 129 IPR010919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03839 Trre-Chr12 54261988 54268125 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Trre12g03839 SAND 2.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03839 - - gmx:100796203 437.573