Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03834 ATGGCCGGTCAATTAGCCGCTGCAGCAACAACCGTAACCAACTCTTATCTTCTCCGCCTTCCTTCTCTCCGGAATAAAGATTTGACTCGAGAAAGATGTGTTACATTCAATAGGAAAAAGATTCCTCCCATCAAAGCTCTTGCAAGCAGTTCTCTGGGAAAATCAGCTACACGGCTCACGGCTGTTTCATCTCCACTATCTACTGATAACCATGGTCCCCTCTCACTCAGTGTTCCCAAATCTCGAAGAACCGGTTCTAGTACCCGTCCACAAGCTTATATATATCATTGGTCTGGCTTTCGAATCCCTGCGAACGCTGAGAAGCCAGAATGGTGGTGGAGGACTTTATCATGTGTACCCTATCTAATAGCACTGCAGATGTCTGCAACTGGGTACTATCTAGAACCTTTACTTGATAAATTCAAATTATTTGAAAATGTGATATTTTATATCCCAGGAGCTGTCAACCGATTGCCAACCTGGTTCCCTATACTATACTGCTATTTGGCTATCGTGGTAGTGGTAAAAAATAAGGACTTCCCCCTTATCTTCAGATTCCATTTAATGATGGGTATGCTACTAGAAATTGCTTTACAGATAGTATGGGTTGCAAGTAATTTCATGCCGCTTATACACTTCAAGGGAACACTTGGGATGTATTACTGGGCTGCTGTGGCGTTGACATATATTATCATAACCATGCATTCCATTAGGTGTGCTCTTCTTGGTACATTTTCAAACATCCCTGTTATTAGTGAATCAGCTTTCCTCCATTCTCTATTTAGTTTAGGAGGGTTCCAGCGGCCGTTTTAG 813 0.4244 MAGQLAAAATTVTNSYLLRLPSLRNKDLTRERCVTFNRKKIPPIKALASSSLGKSATRLTAVSSPLSTDNHGPLSLSVPKSRRTGSSTRPQAYIYHWSGFRIPANAEKPEWWWRTLSCVPYLIALQMSATGYYLEPLLDKFKLFENVIFYIPGAVNRLPTWFPILYCYLAIVVVVKNKDFPLIFRFHLMMGMLLEIALQIVWVASNFMPLIHFKGTLGMYYWAAVALTYIIITMHSIRCALLGTFSNIPVISESAFLHSLFSLGGFQRPF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03834 270 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 35 259 IPR005691 -
Trre12g03834 270 MobiDBLite consensus disorder prediction 63 87 - -
Trre12g03834 270 Pfam Chloroplast import apparatus Tic20-like 86 255 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03834 Trre-Chr12 54230042 54231786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03834 39 269 Chloroplast and Mitochondria Gene Families AT4G03320 48.485 2.00e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03834 - - aprc:113869676 373.244