Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03802 ATGTTTACCTTGGTGGCTTTATTAGGAGGGTTCTTGGTGATTTATCTGTATAGGCCCTATTGGAGTGTAAGAAATTTTCCGGGCCCACCATCTCGACTTGTTGTAGGAAACCTTCCCTTGCTGGCTAAGTATGGCGCTGATATCATCTCAGTCCTTGCCAAGCAATATGGCCCGGTCTTCAGATTTTACATTGGAAGAAAACCTATAATAATCATTGCAGATGCAGAGCTTATTAAAGAGGTCGGAATAAAAAAATATAAAGACATTCCACACAAAAGCCCGTCACCTTCTTTGGCTGCTTCCCCGCTTCACCTGATGAGCCTCCTAATGGCACGGGGTACACCATGGGCTACCATGCGGAACGCCATATTACCATTCTTCCAGCCAACGCATGTATCCGAATTAGTGCCAACAATGCAGTCAGTCATAGAGACAACAACCCAAAACATTGGCTATCAAAATGAAGATTTTAACATATATCAACTAATCCTCAGGCAGACAATTGATATGATAGGAAAAACGTCACTTAGTGTTGATATTGGCCTCTCTAAGCCTAAATCATTTTTTAACAAAGAAGCATCAGATTTCTTAAACAGCCACATTTACTGCACATCCCAACTCAGGGAGATTTTGAAGAGAATACCAGGCACCTCGGACTATAAACTAGAGCATGCTGAGGAAAAACTATGTGGTTATCTTGATGATATTATAGAAAAGAGAATGAAAGATCAAAGCAGCAAAACCTCTTCCAAGGACTTCTTGTCACTCGTTCAAGATGCTAGAGAATCAAAAGCTGGATCGGAAAATGTGTTCACACCTGAACGCATAAGGGCTCTTGCCTTCGAGCAACTCATTGCAGGGGCCACACCTATTGCCTTTACCTTGACTTCCGCTCTCTATTTGGTTGCCGGGCATCCTCATGTTGAGAAAAAACTACTGCAAGAAATTGATGAGTTCGGTCCTGCTGATCAGACGCCAACTGCTCAAGATCTCGATGATAAATTTCCTTATCTTGATCAGGTGATCAAAGAGGCCATGAGAATTTTCGTTATTGCCCCATTAATTCCAAGAGAAACATCAAATGAAGTAGAGATCGGAGGTTACGTCCTTCCAAAGGGGACTTGGGTATGGTTTTCGCCTATAGCTGTAGCACAAGATCCTAAAAACTTTTCAGAGCCGGAGAAATTCAAACCGGAGAGGTTTGACCCCAACTGTGATGAAATGAAACAAAGACATCCTTATGCTTTCGTACCATTTGGAATTGGTCCTCGAGCTTGCCCTGGTCAGAAATATGCCCTGCAACAGATTAAGCTTTCTCTGATTCACTTATATAGTAAATATGTGTTTAGACATTCATCTGATATGGAATTCCCCTTGAAACTTGCATATGGCTTCGCCCAAGGTTTCGTCAATGGTGTCAAAGTTAGAGCCATCAAAAGAACTGATCAGAGAACCTACTAA 1461 0.4203 MFTLVALLGGFLVIYLYRPYWSVRNFPGPPSRLVVGNLPLLAKYGADIISVLAKQYGPVFRFYIGRKPIIIIADAELIKEVGIKKYKDIPHKSPSPSLAASPLHLMSLLMARGTPWATMRNAILPFFQPTHVSELVPTMQSVIETTTQNIGYQNEDFNIYQLILRQTIDMIGKTSLSVDIGLSKPKSFFNKEASDFLNSHIYCTSQLREILKRIPGTSDYKLEHAEEKLCGYLDDIIEKRMKDQSSKTSSKDFLSLVQDARESKAGSENVFTPERIRALAFEQLIAGATPIAFTLTSALYLVAGHPHVEKKLLQEIDEFGPADQTPTAQDLDDKFPYLDQVIKEAMRIFVIAPLIPRETSNEVEIGGYVLPKGTWVWFSPIAVAQDPKNFSEPEKFKPERFDPNCDEMKQRHPYAFVPFGIGPRACPGQKYALQQIKLSLIHLYSKYVFRHSSDMEFPLKLAYGFAQGFVNGVKVRAIKRTDQRTY 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03802 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Trre12g03802 486 PANTHER THROMBOXANE-A SYNTHASE 3 482 - -
Trre12g03802 486 Gene3D Cytochrome P450 14 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 SUPERFAMILY Cytochrome P450 26 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS E-class P450 group I signature 339 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS E-class P450 group I signature 53 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 Pfam Cytochrome P450 27 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03802 486 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03802 Trre-Chr12 53971229 53981894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03802 64 480 Cytochrome P450 AT2G26170 53.968 2.99e-172 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03802 K20771 - gmx:100797803 605.52