Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03755 ATGGGCGATGGAGGTGTCGCATGCATGCCTTTGCAGTATATTATGGAGAAGTTATCGAGTTCAGAGAAAACGCATTGCGGAGGCAATAACGGGAATGGCTTCAACTCCAAGTTGCTTAAGTTTTCTGATAGTGAAAGGAAGAATATGAAGTCAAGGAAGAGTGAATTAGGGTTGGATAGAGTGAGTAAGAGGAGTAGTGGTGATTTTGAGAATGGTGAAATGATATGTGGTGATAAGGTGCTGAAGGAAGAAGTTGAAGAAGGTGAATTGGTTACTACTAATTCGAAGTGGCCTAGAAGTGAAATTGAAGTTGAAAATGGTGAGTTTTTGCCGGAGATGAATTCGATGCCGAGACGAAGTGAAATTGAGAATGGGGAGATTTTGGGTGATAGATGGAAATCAAGGGAGTTTGAGAAGGGAGAGATTCATTCTGGGAAGTGGAGAAGAGATGATGTGGAAAGAGGGGAGATAGTTCCTGAAAAGGGTAAGAGAGGAGAAAATCAATATAGACCGTGGAGAGGTATGAATCATGATATTGAGAAGGGAGAATTTATTCCAGATAGATGGTATAAGGGAGAAATGGGGAAGAATGATTATGGTAACAGCAATAACCGAAGACATTATTCGAGTAAGGACAAAGGGTGGAAATTTCAACGCGAACGTACTCCACCACCTTCTTGGAGATATACAGGGGAAGATTCTTTTAGGAAGAAAGAGTTCATTAATAGAAGCGGGAATCAGCATGCAAAAAATTCTCCCAGGTGGGAGAATGCACAGCAGAGGAATGTAAGGATCAGTTCAAAGATTGTAGATGACGAGAAAAATGCTTACAGCAATGGTAAGGATCATACACGAGATTACACTTCCTCTGGAAGTCGCTTGAAGAGGCTCAGTAATGATTTTGACAGCCATGAACGGAAGCATTCTGCAGATTTTACAAGTTTAAAAAGTCGAAGGCTTTCTGATGAAAGCTATCGCTGTGGTTATTCAGAGAACTATTCTCGTCGCCCTGTGGAACAGTCTTATAGAAATAATAATTCTACTAGACTATCTGCAGAAAAATATTCTTCTAGAAATCATGAATCTTCTTTGTCTGCCAGACCAGCTTATGACAGGCATGAACGCAGTCCTGTTCATTCTGAGTGGTCCCCGCGTGACCGAAGCAGGCATTATGATCATAGAGACCGCACTCCAGTGCGCCGATCACCCTTTGGTCGTGAGAGATCTCCATATAGCCGGGAGAAATCCCCCCATGGCCGGGAGAGATCCCCCTATGGTCGGGAGAGGTCCCCATATATGAGGAGCTGGGACAAAAGTCGACAGCATGACCATAAGTTGAAAAGTCCTGCGCACACCGAGCAGTCACCCCAAGATCAAGGTTGGCGACAGCATGATCATAAGTTGAAAAGTCCAGCACGCACCGAGCAGTCACCCCAAGATCAAGGTTGGCAACAGCATGACCATAAGTTGAGAAGTCCAGCACGCACCGAGCAGTCACCCCAAGATCAAGGTTGGCGACAGCATGATCATAAGCTGAGAAGTCCAGCATGCACCGAGCAGTCGCCACAAGATCAAGGTTGGCGTCATGATCACAGGGATTTGACTCCACATTTAGTAGAACGACCCCCCCTTGATCGAACTAGGGAAGATGTTCATGAAGAAACAAGTTGCAAAACCTCATCAAGTGAAAAACATAACTCCCCAAATAGTTGTAAGAGTGATGAAGATAAGCACATTCAAACGGAGTCAAGTTGTTCAGTTACAGAATCTCAAGGTGAAAGAAACATTCAAAACACCAATGAGTCAATTGAGAAAGATATTAGTAGTAGTCAACCCGTTGACGTTGAGGAACAGCAGTTCTGTAGCCCAACTGTCAACCACAAAGAATCTCCCCACTGTGAGCCACAACCACCTCCTGATGAGCTGCTTTCAATGGAAGAAGATATGGACATTTGTGATACCCCTCCTCATGTCCCTGTGGTGACAGATTTGTCATCAGGTAAATGGTTTTACCTTGATTATGAAGGTGTAGAAAATGGGCCTGCCAAATTGTGTGACATCAAGGTCCTTGTTGATGAAGGGGTGCTAATGTCAGATCACTTTATCAAGCACTTGGATAGTGACAGATGGTTAACAGTTGAAAATGCAGTGTCGCCATTGGTTGCTCATAGTTTTCCTTCCATTGTGTCAGATACAATAACTCAGCTTGTAAATCCTCCAGAAGCTTCTGGTAATCTTTTGGCCGATACTGCAGATATTCAATCTGGTCCTGAGAATCATCCGGAAATGCTGGCCCCCACACCGCGGCCATGCATACAACCTAATGAGAGTGTGCTTACATATGAACGTTTGGACAACTTCTACATTGATGAAAGAGTTCAAAATCTGTTGGAGGGTTATGATGTCATTCCTGGGATGGAACTTGAGGCAGTAAAAGAAGCTTTGCAAATGAAATTTGAATATGTGAAAGAGGATGGATTAGGAGACTATGAAGGTTTTCCTTGGCATGTTTCCGACCATAGGAAAGATTGTGATTCAAGTACTGATTTAGCAACAAGAGATTCTGAATCCCAGACAAGTATATCTTTTGACAACAAGGATAATGGACTTGGCTTTGGCATTCCTAATGATTGGTTTTCCACTCGTTGGTCATGCAAAGGTGGTGACTGGAAGAGGAACGATGATGCCCAAGATAGATCTTCTAGGAAAAAACTTGTTCTAAATAATGGTTTTCCATTGTGCCAAATGCCAAAGTCTGGATGTGAAGATCCTCGATGGCCTGAAAAAGATGACTTGTATTTTCCTTCTCAAAACAGGAGGCTTGATCTCCCTTTGTGGGCTGTTGGTGCCGATGAGTGGGTTGATTGCAATGCTGCAAGTAGGTCAGTTCAAAGTAAGCCTCCTTTTGTCAAAGGAGTGAAAGGTAATGTTCTTTCGGTGGTAAGAATAAATGCATGCGTTGTCAATGACCAGGGATTGTTGCTCTCTGAGTCACGCCACCAGACCCGAAGCAAGGATAGACAGCATCCAAGGTCAACTCGGCCATTCACTTCAACCAGAGATAGTAGGAGATCATCAACCGAAGAAGATTCTCAGTCAAAATCAGTTAGTGATCAAGGTTCTTACCAAAGCATGGAGTTCATTAGTGTCCCTAAAGACCATCTCTGTACTATCCAGGAGTTGCAGCTACATTTGGGTGACTGGTATTACATTGATGGTTCTGGGCGTGAGAGAGGGCCTTCATCATTTTCAGAGCTACAGTATTTAGTAGATCAAGGAATTATAAAAAGGCATAGCAGTGTGTTTAGGAAACGTGATAAACTTTGGGTTCCTATTGCCTCTGCCACAGAAACTTCAGATGTCTGCCTCACGAGCCACCAAAAAAGCAGTTCAACATTGGGTGCATGCTCTGATCATCCATCAAACCAAACTCAAGGCGTTTTATACGGTGAATCTTACACAAGTTCAAGTTTGTTTAACATGATACACCCTCAATTTGTTGGTTTTACTCGCGGGAGGTTACATGAACTGGTTATGAAATCATACAAGAGCCGGGAGTTTGCCGCTGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGATATTGAGAAACAGATATACTGGAAATCAGAAGGCGACACACGAGCTGCCAAAAGAGCCCGTATGCTGGTTGATGATAGTGATGAAGACAGTGGTTTGGAAGATGATGTTACCATTGACAAGAATGAACCCGCTTTTGAGGATCTATGTGGTGATGCTACTTTTCCCAAAGAAGAAATTGGTATCGCTGATACTGAAGTTGGAAGCTGGGGCTTATTGGATGGTCCAGTTTTGGCACGGATTTTCCATTTTTTGAGATCTGACTTTAAGTCCCTTGTATTTGCATCAATGACCTGCAAGCATTGGAGTGCTGCTGTAAGGTTTTACAAGGAAGTCTCAATACAGGTCAATTTGTCATCCTTAGGGCATTCTTGCACTGATACTGTGTTGTGGAACATTATGAATGCTTATGAGAAAGCCAAGATCAATTCTATAATTCTAATGGGTTGTAACAATATTACGGCTGACATGCTTGAGAAAATTCTTCTTTCATTTCCCGGTTTATGTACCATAGACATCAGAGGATGCAGCCAGTTTGGTGAGCTAACTCCTAAATTTACCAATGTGAAATGGATCAAGAGCAGAAGTTCACACAAGGATAGAATTGCAGAGGAGCCTCATAAAATTAGAAGCCTTAAACATATTACAGAGCAAGCTTCATCTGCTTCCAAATCCAGCAATTTAGGAATAGATGATTTTGGTCAGTTGAAGGAGTATTTTGATAGTGTGGATAAGAGAGACTCGGCAAAGCAATTATTTCGTCAAAACCTATACAAGCGTTCCAAACTTTATGATGCTAGAAGGTCCTCTTCCATTCTATCTAGGGATGCTCGTACTAGACGTTGGGCAATTAAGAAGTCTGAAAGCGGTTTTAAGAAGATGGAGGAATTCCTTGCTTTAAGACTAAAGGAAATCATGAAGACAAACTCCTGTGACTTCTTTGTGCCCAAGGTTGCAGAAATTGAGGCCAAAATGAAAAGTGGTTATTACAGTAGCCATGGATTGAGCTCTGTCAAAGAGGACATACGTAGAATGTGCCGTGATGCAATGAAAGTGAAAAATCGGAATGATGCCAGTGACATGAATCACCTTATCACATTATTTTTTCAACTGGGAACACAGTTGGAAACAAGTTCTAAGAATGTGAACGGCAGAGATGTCCTACTGAAGTCATGGGACAATGACTTGCCACCAATGTTAGGCTCTACTTCCTCAAAGTATAAGAAAGGTAGATTAGTGAATGAAAGGAAGTACAGGAGTAATGGAAAACATAATGTTTTGGATAATGTAGAGTATACCTCTGATAGAGAAATTAGGAGGCGCTTATCAAAGTTGAATAAGAAATCTGTGGGCTCAGAGAGTGAAACATCCGATGATCTTGATAGGTCTTTTGAAGATGAAAAGAGTGACAGTGATACTACGACTGAGTCTGAGAGTGACCATGAAGTATGTTCACAAGTTATGGTTAAGGAGCCAAGAGGGGGTGGATGCTTCTCACCTGAGGAAGAGTTGGATTTTATAACTGATGACCGGGAGTGGGGTGCTCGCATGACGAAAGCAAGCCTGGTTCCTCCAGTTACCAGGAAATATGAAGTCATTGATCATTATTGCATTGTAGCTGATGAGGAGGAGGTGCAGAGGAAGATGCGGGTTTCATTACCAGATGATTATGCAGAGAAGCTGAGTGCACAAAAGAATGGCACAGAGGAGTCAGATATGGAACTTCCCGAAGTCAAAAGTTTCAAACCTAGGAAGCAGCTTGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTACACACACAACCTTTTGCTTGATTCAATGCCAGAGGAGTTAGATTGGTCTCTGCAGGAGAAGCATTTGTTTGTAGAAGACACGCTCCTTCGAACATTGAATACGCATGTTAGGAGCTCTACTGGAACTGGAAATACTCCAATGAGCTACCCTTTGCAGCCTGTTATTGACGATATTAAAAGACGCGCTGAAGAAGGTTGCGATACAAGAATGATTAAAATGTGTCAAGGTATTCTAAAGGCCATTGGCAGTCGTCCAGATGACAAATATGTAGCTTATAGAAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGCTTCTCTCAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTACAGATCCAGCACCAGAATTCTACAACATCTACCTTGAGAGACCAAAGGGCGATGCTGATGGGTATGACTTAGTTGTCGTTGATGCCATGCACAAGGCTAATTACGCCAGTCGAATATGTCATTCTTGCCGACCCAATTGTGAAGCCAAAGTTACTGCTGTTGATGGTCAGTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGATTACAATTCTGTTACTGAGAGCAAGGAGGAGTATGAAGCATCAGTTTGTCTGTGTGGAAGCCAAGTGTGCCGTGGGAGCTATCTGAATCTGACTGGTGAAGGGGCTTTTCAAAAGGTTCTGAAAGACTCGCATGGAATTCTTGATCGGCATTATTTGATGTTAGAAGCTTGTGAATCAAACTCCGTGTCTGAAGAGGACTATAATGACCTCGGAAGAGCTGGTTTAGGAAGTTGTTTGCTTGGGGGCTTGCCTGATTGGCTTGTTGCCTATGCAGCTCGTCTTGTGAGGTTCATCAATTTTGAAAGAACTAAACTTCCCGAAGAAATTCTGAAGCATAATCTGGACGAAAAGAGAAAATACTTTTCAGATGTATGTCTTGAAGTTGAAAGGAGTGATGCTGAGGTTCAGGCGGAGGGAGTGTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTGGATAAGGTAAGGTATGTTATGAGATGTATTTTTGGTGATCCACGGAAAGCACCGCCTCCTCTTGAGAAGCTCAGTCCTGAAGAAGTTGTTTCGTCTCTCTGGAAAGGAGAGGGCTCATTTGTTGAGGAACTTCTTCAGTGCATAGCTGCTTATGTAGAAGAAGGGATCTTGAATGATCTCAGATCCAAAATTCATGCTCGTGATCCTTCAAGTTCGGCAGATATTCAAAAAGAGCTTCGGAAATCTCTATTATGGTTGAGGGATGAGATTCGAAGTCTTTCTTGTACATATAAATGCCGGCATGATGCTGCTGCTGACTTACTCCATATTTATGCTTATACCAAGTACTTCTTTAGAATACAGGAATATCAAACCATTACTTCACCGCCTGTCCATATTAGTCCACTTGACTTAGGCCCCAAGTATACTAACAAGTTGGGAGCAGAGATTCAGGAGTACCAAAAGGTATATGGCGAAAATTATTGTTTAGGGCAGCTGATTTTTTGGCATAATCAGAGTAATTCAGATCCAGATCAGACCTTGGTTAGAGCAAGCAGGGGGTGTTTGTCTTTACCAGACATCAGTTCCTTTTATGCCAAGGCTCAGAACCCATCACAGAATCGTGTTTATGGTCCAAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAGCAACCGCAGAGATCTTGGCCCAAAGACCAGATATGGTTGTTTAGATGTTCTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAATAAATAACTCTACACTGGACAGGGACATGGTTCAATGGTTGAAGCACAGACCTGAGGCCATATGGGACCGTTAA 7362 0.425 MGDGGVACMPLQYIMEKLSSSEKTHCGGNNGNGFNSKLLKFSDSERKNMKSRKSELGLDRVSKRSSGDFENGEMICGDKVLKEEVEEGELVTTNSKWPRSEIEVENGEFLPEMNSMPRRSEIENGEILGDRWKSREFEKGEIHSGKWRRDDVERGEIVPEKGKRGENQYRPWRGMNHDIEKGEFIPDRWYKGEMGKNDYGNSNNRRHYSSKDKGWKFQRERTPPPSWRYTGEDSFRKKEFINRSGNQHAKNSPRWENAQQRNVRISSKIVDDEKNAYSNGKDHTRDYTSSGSRLKRLSNDFDSHERKHSADFTSLKSRRLSDESYRCGYSENYSRRPVEQSYRNNNSTRLSAEKYSSRNHESSLSARPAYDRHERSPVHSEWSPRDRSRHYDHRDRTPVRRSPFGRERSPYSREKSPHGRERSPYGRERSPYMRSWDKSRQHDHKLKSPAHTEQSPQDQGWRQHDHKLKSPARTEQSPQDQGWQQHDHKLRSPARTEQSPQDQGWRQHDHKLRSPACTEQSPQDQGWRHDHRDLTPHLVERPPLDRTREDVHEETSCKTSSSEKHNSPNSCKSDEDKHIQTESSCSVTESQGERNIQNTNESIEKDISSSQPVDVEEQQFCSPTVNHKESPHCEPQPPPDELLSMEEDMDICDTPPHVPVVTDLSSGKWFYLDYEGVENGPAKLCDIKVLVDEGVLMSDHFIKHLDSDRWLTVENAVSPLVAHSFPSIVSDTITQLVNPPEASGNLLADTADIQSGPENHPEMLAPTPRPCIQPNESVLTYERLDNFYIDERVQNLLEGYDVIPGMELEAVKEALQMKFEYVKEDGLGDYEGFPWHVSDHRKDCDSSTDLATRDSESQTSISFDNKDNGLGFGIPNDWFSTRWSCKGGDWKRNDDAQDRSSRKKLVLNNGFPLCQMPKSGCEDPRWPEKDDLYFPSQNRRLDLPLWAVGADEWVDCNAASRSVQSKPPFVKGVKGNVLSVVRINACVVNDQGLLLSESRHQTRSKDRQHPRSTRPFTSTRDSRRSSTEEDSQSKSVSDQGSYQSMEFISVPKDHLCTIQELQLHLGDWYYIDGSGRERGPSSFSELQYLVDQGIIKRHSSVFRKRDKLWVPIASATETSDVCLTSHQKSSSTLGACSDHPSNQTQGVLYGESYTSSSLFNMIHPQFVGFTRGRLHELVMKSYKSREFAAAINEVLDPWINARQPKKDIEKQIYWKSEGDTRAAKRARMLVDDSDEDSGLEDDVTIDKNEPAFEDLCGDATFPKEEIGIADTEVGSWGLLDGPVLARIFHFLRSDFKSLVFASMTCKHWSAAVRFYKEVSIQVNLSSLGHSCTDTVLWNIMNAYEKAKINSIILMGCNNITADMLEKILLSFPGLCTIDIRGCSQFGELTPKFTNVKWIKSRSSHKDRIAEEPHKIRSLKHITEQASSASKSSNLGIDDFGQLKEYFDSVDKRDSAKQLFRQNLYKRSKLYDARRSSSILSRDARTRRWAIKKSESGFKKMEEFLALRLKEIMKTNSCDFFVPKVAEIEAKMKSGYYSSHGLSSVKEDIRRMCRDAMKVKNRNDASDMNHLITLFFQLGTQLETSSKNVNGRDVLLKSWDNDLPPMLGSTSSKYKKGRLVNERKYRSNGKHNVLDNVEYTSDREIRRRLSKLNKKSVGSESETSDDLDRSFEDEKSDSDTTTESESDHEVCSQVMVKEPRGGGCFSPEEELDFITDDREWGARMTKASLVPPVTRKYEVIDHYCIVADEEEVQRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKSFKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFVEDTLLRTLNTHVRSSTGTGNTPMSYPLQPVIDDIKRRAEEGCDTRMIKMCQGILKAIGSRPDDKYVAYRKGLGVVCNKEEGFSQDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSTDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACESNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLDEKRKYFSDVCLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEEVVSSLWKGEGSFVEELLQCIAAYVEEGILNDLRSKIHARDPSSSADIQKELRKSLLWLRDEIRSLSCTYKCRHDAAADLLHIYAYTKYFFRIQEYQTITSPPVHISPLDLGPKYTNKLGAEIQEYQKVYGENYCLGQLIFWHNQSNSDPDQTLVRASRGCLSLPDISSFYAKAQNPSQNRVYGPRTVRSMLARMEKQPQRSWPKDQIWLFRCSPKFFGSPMLDAVINNSTLDRDMVQWLKHRPEAIWDR 2453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03755 2453 MobiDBLite consensus disorder prediction 568 582 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 524 560 - -
Trre12g03755 2453 Gene3D SET domain 1895 2057 IPR046341 -
Trre12g03755 2453 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 484 2452 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 458 473 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 190 598 - -
Trre12g03755 2453 SMART set_7 1892 2032 IPR001214 GO:0005515
Trre12g03755 2453 MobiDBLite consensus disorder prediction 45 69 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 297 325 - -
Trre12g03755 2453 ProSiteProfiles SET domain profile. 1887 2026 IPR001214 GO:0005515
Trre12g03755 2453 MobiDBLite consensus disorder prediction 245 265 - -
Trre12g03755 2453 SUPERFAMILY SET domain 1901 2049 IPR046341 -
Trre12g03755 2453 Pfam SET domain 1964 2026 IPR001214 GO:0005515
Trre12g03755 2453 CDD F-box_SF 1283 1313 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 334 364 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 999 1031 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 266 290 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 1606 1633 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 365 451 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 205 219 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 998 1040 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 1615 1633 - -
Trre12g03755 2453 Pfam Protein SET DOMAIN GROUP 2 C-terminal 2037 2452 IPR045606 -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 583 598 - -
Trre12g03755 2453 CDD SET_SETD2-like 1900 2048 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 45 67 - -
Trre12g03755 2453 MobiDBLite consensus disorder prediction 1652 1691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03755 Trre-Chr12 53505956 53518175 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre12g03755 SET 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03755 K22748 - gmx:100776205 3711.38