Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03751 ATGACAAAACTTGGTTATCTTGTTGTTTATGTCATTCTTTTTTGTGCTTTTGCCAAAGGAGGTTCAGAGGGTAAGAGGTGGAAACATGAAGACTTTTATAGATATTATCTTGGAAATAAGGCAGAGCAGGTGTGGAAACATTGTAGGAATGAAATGATAGAGAGGAATTATGATATCGAAGAATTTGACTTGCATTTATTGAATGAGATGGGCGAAAAGAGATCTAAATTTCTACCTCCCCATGTGAAACAACACTTTCTAGATTGCATATCAAACAGAAATTTTCCTATTCCTGTTTCGGAACAAGAGGGATATTTGTTGAAGAAGCATTATGAGTCGTTTTTTGGTTTATCAGATGGACATAGATATTTACTCTCAGAGTCACAACATAATCAGACACCACCAAGTCCTGACTCTGTTCCATCATCTGGATCATCACCGAAGCCAAAAAGTCACGTTGCAGCACAAGCCACCTTGACACCTCCAACTCCTGGACTTCCATACGATGATTTTCTGCTCACTCCACCATTTTCACCACCACCTCCTCCTCATGACGACAAGCAACAAAAATCAATTATTATTGCTGTAGTTGCATCAGTAATTATAATCTTAATAGGTTTGTTGCTATGCTGTCGCGAGGTGAAGAAGAGCAAAATAAGTGAGAAAGATGACAGGCCTTTACTCATATTAAGCTCGAGTGACTTCTCTGGTGGTAGTTCACAAAAGTCTATTGCTTTTGAAAATTCTGATATGAGAGAACATGGTATTAACTATGGAATGAATCCTTCTACTGTTAGGAATTTGTCCATTAAGAATGAAGTCAACAACGCTTCACTGAATGAGATAACATCATCAGATGACAAGGGACAAGTACCGGTGTCTCAATTAAAACATCCTACAGGAAGATCAGTCCCTGAGGCTCCACCACCACCGCCGCCTCCACCACCTGCTCCTGCACCTCGGCCTCGGCCTCCACCTCCTCCAAAAATATCTCGGGCTCCACCTGCTCCTCCCAAACCAATGGCAGGTAGAAACCAAAAATCACCTCTAGGACCACATCGTACTAGTGAGGCCGATGATGACTCCGATGCTCCAAAACCGAAATTAAAGCCATTTTTCTGGGATAAGGTTTCAGCAAATCCTGATCAAGCTATGGTCTGGCATGAGATCAGAGCCGGTTCATTCCAGTTCAGTGAAGAGAAGATAGAGTCTTTATTTGGCTGCACCAACCAAAACAGAAATGAAAGAAGAAAAGACGCCCCTTCTTTAGAACCTTCGGTCCAGTACATTAAGATTATTGAACCCAAGAAAGCACAGAATTTATCGATTCTTTTACGTGCTCTGAATGTGAGCACAAAAGAAGTTATTGACGCCCTTAATGAAGGTGATGAGATTCCTGTTGAGCTCATCCAAACAGTATTGAAGATGTGGCCAACAATGGATGAGGAATCAAAGCTAAAGTTATTCACAGGCGACATTTCTCAACTTGGCCCTGCAGAGAGATTTCTCAAGGCTTTGGTTGATATTCCACTAGCTTTCAAACGTCTCGAGTCTCTACTGTTCATGTTTACACTTCCGGAAGAGGCTTCAAGCATTAAGGAATGCTTTACAACATTAGAGGTTTCTTGCAACGAACTAAGAAAAAGCAGGCTCTTCCAAAAGCTATTAGAAGCAGTTCTAAAGACAGGAAACCGATTAAATGATGGCACCTATCGTGGTGGGGCTCAAGCATTTAAGCTTGACACACTTTTAAAACTTGCAGATGTAAAAGGAACAGACGGCAAGACTACACTGTTACACTTTGTGGTTCAAGAGATCATACGTTCCGAGGGCATAAGAGCTGTAAGAACAGCGAAAGAAAGCCAAAGCCATTCTAGTATGAAAACCGAGGATTTGATTGATGATTCAAATGGGAAACCAGAAGAGCACTATCGCAGCCTTGGCCTTCAAGTAGTTTCAGGTCTAAGCACCGAACTAGAAGATGTTAAAAAGGCAGCATTAATAGACGGTGATGCTGTAACGGCTGCAGTGTTGAAACTTGATCATAGATTGGCAAAAACCGAAGAACTGTTGAATACTGATCTGAAGAATCTAGAAGAAGAGAGCGAGTTTCAACGTTCCCTTGAAGATTTTGTGGAGAATGCAAAAGAGGAAGTGAAATGGTTGACAGGGGAAGAGAAGAGGATAATGGCCGAAGTTAAGAACACTGCAGATTATTTTCACGGAAACGCAGGAAAAGATGAAGGGTTGCGTTTGTTTGTGATTGTACGCGATTTCTTGTTAATGTTGGACAAGGTGTGCAGAGAGGTTAAAGTATCAACCAAGACAGTAGCGATTAAGGATCCTTCTTCATGCAAGAAAGAACCTTCTTCAATGTCATCCTCTCCGGATACTCATCAACCATCACCTGATATGCATAGGAGGCTCTTTCCAGCCATAGCAGAGAGGAGAATACACGACTCTAGTTCCGACGACGAAGATGACGATAATGAGAGATTACCAACGTAG 2508 0.4167 MTKLGYLVVYVILFCAFAKGGSEGKRWKHEDFYRYYLGNKAEQVWKHCRNEMIERNYDIEEFDLHLLNEMGEKRSKFLPPHVKQHFLDCISNRNFPIPVSEQEGYLLKKHYESFFGLSDGHRYLLSESQHNQTPPSPDSVPSSGSSPKPKSHVAAQATLTPPTPGLPYDDFLLTPPFSPPPPPHDDKQQKSIIIAVVASVIIILIGLLLCCREVKKSKISEKDDRPLLILSSSDFSGGSSQKSIAFENSDMREHGINYGMNPSTVRNLSIKNEVNNASLNEITSSDDKGQVPVSQLKHPTGRSVPEAPPPPPPPPPAPAPRPRPPPPPKISRAPPAPPKPMAGRNQKSPLGPHRTSEADDDSDAPKPKLKPFFWDKVSANPDQAMVWHEIRAGSFQFSEEKIESLFGCTNQNRNERRKDAPSLEPSVQYIKIIEPKKAQNLSILLRALNVSTKEVIDALNEGDEIPVELIQTVLKMWPTMDEESKLKLFTGDISQLGPAERFLKALVDIPLAFKRLESLLFMFTLPEEASSIKECFTTLEVSCNELRKSRLFQKLLEAVLKTGNRLNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAVRTAKESQSHSSMKTEDLIDDSNGKPEEHYRSLGLQVVSGLSTELEDVKKAALIDGDAVTAAVLKLDHRLAKTEELLNTDLKNLEEESEFQRSLEDFVENAKEEVKWLTGEEKRIMAEVKNTADYFHGNAGKDEGLRLFVIVRDFLLMLDKVCREVKVSTKTVAIKDPSSCKKEPSSMSSSPDTHQPSPDMHRRLFPAIAERRIHDSSSDDEDDDNERLPT 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03751 835 MobiDBLite consensus disorder prediction 780 835 - -
Trre12g03751 835 PANTHER FORMIN-RELATED 127 823 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre12g03751 835 MobiDBLite consensus disorder prediction 618 638 - -
Trre12g03751 835 ProSiteProfiles Formin homology-2 (FH2) domain profile. 359 789 IPR015425 -
Trre12g03751 835 SUPERFAMILY Formin homology 2 domain (FH2 domain) 428 775 - -
Trre12g03751 835 MobiDBLite consensus disorder prediction 786 800 - -
Trre12g03751 835 MobiDBLite consensus disorder prediction 281 369 - -
Trre12g03751 835 MobiDBLite consensus disorder prediction 127 160 - -
Trre12g03751 835 MobiDBLite consensus disorder prediction 353 369 - -
Trre12g03751 835 Pfam Formin Homology 2 Domain 361 763 IPR015425 -
Trre12g03751 835 SMART it6_source 359 781 IPR015425 -
Trre12g03751 835 MobiDBLite consensus disorder prediction 303 342 - -
Trre12g03751 835 MobiDBLite consensus disorder prediction 801 823 - -
Trre12g03751 835 MobiDBLite consensus disorder prediction 127 158 - -
Trre12g03751 835 Gene3D Formin, FH2 domain 365 788 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03751 Trre-Chr12 53487866 53492981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03751 174 818 FH2 protein (formin) Gene Family AT5G54650 49.302 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03751 - - psat:127086789 1067.37