Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03741 ATGTCTTCCTCTAATCTCTTCGCAACTATTCTCATCTCATTAACCTTAGCTCTAATCACTCAAACGTCTTTTGCACTCAATGACCCTCTTTCCCACATTTGTTCAAACTCCGAGAATTTCACAGCCTATAGCCCATATGAATCGAACTTGAAAACACTCATCAACTCACTTATATACAAAACCCCTTCAACCGGTTTTGGTATTGGATCAGTGGGCCTGGCTCAATCCCAAAACCAAAAAGCATATGGGCTTGCTCTTTGTCGTGGTGATGTATCAACCTCAGAGTGCAAAACTTGTGTCTCTGATGCAACTAAAGAAATCCAAAGTCGTTGCCCATACAATAAAGGTGCGATCATATGGTACGATAATTGCATGTTCAAGTACTTGGACAGTGATTTCATTGGCAAAATTGATAATACAAACAAGTTCTCTTTATTGAATGTACAAAGTGTTAATGATCCTATCAAATTCAACAACATGACTAAGGACTTATTGAGCTTACTTGCTAATGAAGCTTCTATGGATAAAATATTGTATGCTAGTGGAGATTTGAAGATTGGAGAATCAGAGAGAATTTATGGGCTAACTCAATGCACTAGAGACCTTTCTATTGTTGATTGTAAGAAATGTCTTGATGATGCAATTAGTGAACTTCCAAATTGTTGTGATGGGAAAAAAGGAGGCAGAATTGTTAGTGGAAGTTGCAACATTCAATATGAAGTTTACTCATTTGTTAAGGAGTAA 744 0.3696 MSSSNLFATILISLTLALITQTSFALNDPLSHICSNSENFTAYSPYESNLKTLINSLIYKTPSTGFGIGSVGLAQSQNQKAYGLALCRGDVSTSECKTCVSDATKEIQSRCPYNKGAIIWYDNCMFKYLDSDFIGKIDNTNKFSLLNVQSVNDPIKFNNMTKDLLSLLANEASMDKILYASGDLKIGESERIYGLTQCTRDLSIVDCKKCLDDAISELPNCCDGKKGGRIVSGSCNIQYEVYSFVKE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03741 247 Gene3D - 27 133 IPR038408 -
Trre12g03741 247 Gene3D - 139 244 IPR038408 -
Trre12g03741 247 Pfam Salt stress response/antifungal 153 241 IPR002902 -
Trre12g03741 247 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Trre12g03741 247 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 10 246 - -
Trre12g03741 247 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Trre12g03741 247 FunFam Cysteine-rich receptor-like protein kinase 25 141 244 - -
Trre12g03741 247 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03741 Trre-Chr12 53420444 53421187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03741 1 246 Pollen Coat Proteome AT4G20670 35.294 3.54e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03741 - - gmx:100527155 375.555