Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03734 ATGGCTTCCTCAAACCTTATTCTCTTCTCAATTACCTTTGCGTTCCTCATGCAAACATCTTTTGGAACCGACTCACTTTCTCATTTTTGTTCAAACTCGGGTAACTTCACTGCCCACAGCGCATATGAATCAAACTTGAAAACACTCATCAAATCACTTATCTATAAGACGCCTTCAACAGGTTTCGGCATTGGATCAGTGGGACTGGCCAAATCAAAAAACCAAAAAGCATATGGGCTAGCTCTTTGTCGTGGCGATGTATCAACCTTAGAATGCAAAACTTGTGTTTCGCAAGCAAGCAAAGAAATTCTCAATCTTTGTCCATACAATAAGGGTGCTATTGTATGGTACGACAATTGCATGTTGAAGTACTTGAACATTGATTTCTTTGGCAAAATTGATAATAAAAACAAGTTCTCTTTATTGAATGTACAAAATATTGATAATCCTATCAAATTCAACAACATAACTAAGGACTTATTGAGCTTACTTGCTAATGAAGCTTCTATGGATCATAAATTTTATGCTAGTGGAGAATTGAAGATTGGAGAATCAAAGAGAGTTTATGGGTTAACTCAATGCACTAGAGACCTTTCTAGTGTTGATTGTAAGAAATGTCTTGATGATGCAATTAGTGAACTAATACCAAATGGAAAAAAAGGAGGCAGAGTTGTTGGTGGAAGTTGTAACATTCGATATGAAATTTACCCGTTTGTTGAGGAGTAA 726 0.3609 MASSNLILFSITFAFLMQTSFGTDSLSHFCSNSGNFTAHSAYESNLKTLIKSLIYKTPSTGFGIGSVGLAKSKNQKAYGLALCRGDVSTLECKTCVSQASKEILNLCPYNKGAIVWYDNCMLKYLNIDFFGKIDNKNKFSLLNVQNIDNPIKFNNITKDLLSLLANEASMDHKFYASGELKIGESKRVYGLTQCTRDLSSVDCKKCLDDAISELIPNGKKGGRVVGGSCNIRYEIYPFVEE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03734 241 Gene3D - 22 129 IPR038408 -
Trre12g03734 241 Gene3D - 135 238 IPR038408 -
Trre12g03734 241 ProSiteProfiles Gnk2-homologous domain profile. 24 129 IPR002902 -
Trre12g03734 241 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 6 240 - -
Trre12g03734 241 FunFam Cysteine-rich receptor-like protein kinase 10 137 238 - -
Trre12g03734 241 Pfam Salt stress response/antifungal 147 235 IPR002902 -
Trre12g03734 241 Pfam Salt stress response/antifungal 30 124 IPR002902 -
Trre12g03734 241 ProSiteProfiles Gnk2-homologous domain profile. 135 238 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03734 Trre-Chr12 53388950 53389675 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03734 26 240 Pollen Coat Proteome AT4G20670 40.000 3.90e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03734 - - gmx:100527155 337.421