Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03724 ATGAGTAATTACTTCAAAGTTTTGATTCTTTGTCTTTTGGCAGTTGCATCAACAACTCAAGCTCAATTGCAGCTTGGATTTTATACTTATAGTTGTCCAAGTGCTGAACAAATCATTCAAAACTTTGTTCATGAACATATCCACAACGCTCCATCACTTGCTGCAACATTAATAAGAATGCACTTTCATGATTGTTTTGTTAGAGGATGTGATGGATCAATCCTTTTGAACTCAACAAACAAACAAGCTGAAAAAAATGCTCCTCCAAATCTTACAGTTAGAGGCTTTGATTTTATTGACAGAATAAAGAGTCTTGTTGAAGCTGAATGCCCTGGTGTAGTCTCTTGTGCTGATATAATAGCTTTATCTGCAAGAGACTCTATTGCAGCCACAGTAAGTACTTAA 405 0.3556 MSNYFKVLILCLLAVASTTQAQLQLGFYTYSCPSAEQIIQNFVHEHIHNAPSLAATLIRMHFHDCFVRGCDGSILLNSTNKQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIIALSARDSIAATVST 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03724 134 Pfam Peroxidase 40 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03724 134 Gene3D - 23 134 - -
Trre12g03724 134 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03724 134 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03724 134 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03724 134 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03724 134 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Trre12g03724 134 ProSiteProfiles Plant heme peroxidase family profile. 22 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03724 134 FunFam Peroxidase 26 134 - -
Trre12g03724 134 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03724 134 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03724 134 PANTHER PEROXIDASE 25-RELATED 12 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03724 134 SUPERFAMILY Heme-dependent peroxidases 22 130 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03724 Trre-Chr12 53290222 53291240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03724 7 130 Peroxidase AT4G11290 65.079 1.39e-59 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03724 K00430 - gmx:100803114 219.164