Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03671 ATGTCACTCCCACCACCGATCCCACCACCGTCACTTTCAACTCCACCAAAGGTAAGGCCAACGGAGCTACCAATCCGGCAAATTCCAGGAACTCATGGATGGCCAATACTAGGTCCCTTGTCAGATAGATTAGACTATTTCTGGTTCCAGAAACCAGAAAACTTCTTCAGAACACGAAAGGAAAAATACAAAAGTACTGTGTTCCGTACCAATATTCCTCCTACGTTTCCTTTCTTCACAAACGTTAATCCTAACATCATTGCTGTTCTTGATTGTAAATCTTTCTCTCACCTTTTCGACATGGATCTTGTTGATAAAAAGGATATTCTGGTTGGTGATTTTGTTCCTAGTGTGCAATTCACTGGGAATATTAGAGTTGGTGTTTACCAAGATGTTTCTGAACCTCAACATGCTAAGGCTAAGAATTTCGCCATGAACATATTGAAACAAAGCTCAAGCATATGGGTACCAGAACTTATAGCGAACCTCGACATATTTTTCGACCAAATTGAAGCAACATTGTCCAAATCTTCATCAGCTGGTTACTTTTCCCCACTGCAGCAGTTTCTGTTCACTTTCCTAAGCAAAGTTCTTGCCAGAGCTGATCCTTCCCTTGACCCGAAAATCGCCGAATCAGGCTCCTCCATGCTTAACAAATGGCTCGCGGTTCAGCTTCTACCAACTATTAGTATTGGCACCATTCAACCGCTCGAAGAAATCTTCCTTCATTCGTTTTCTTACCCCTATGCTCTTGTTAGTGGAGATTACAACAACCTCTACAACTTCATCAAACAACATGGTAAGGAAGTGATAAAAAGCGGAATAGAGTTCGGGTTGAGTGAAGATGAAGCAATCCACAACTTGCTTTTCGTGTTGGGTTTTAACTCATATGGCGGGTTTTCAATTTTCCTTCCAAATTTGATAAACACGATAGCGAATGGCCCAACTGGTTTGCAAGATCAGCTGAGGAAGGAAGCGAGAGAGAAAGGCGGTTCAACTCTCGGGTTCAGCTCGTTGAAAGAAATGGAACTAATTAATTCGGTGGTTTACGAAACCCTTCGGTTGAATCCACCAGTTCCACTTCAGTTTGGTCGAGCCAGAAAGGATTTTCAATTAAGTACATATGACTCCGCGTTCAACGTGAAGAAGGGTGAGTTATTATGTGGTTATCAGAAGCTTGTAATGAGAGACCCGGTCGTGTTTAATGAACCGGATCAATTTATACCGGACCGGTTCACTAAAGAGAAAGGGGCCGAGTTGTTGAACTATTTGTATTGGTCTAATGGACCACAAAACGGTTCGCCAAGTGTGTCCAACAAGCAGTGTGCGGGCAAGGACATTGTGACCTACACCGCGGCCTTGATTGTGGCGCACTTGCTTCGTAGGTACGATTTAATTAAAGGGGATGGCGGTTCCATCACTGCCTTAGAGAAGGCCAAATGA 1443 0.4331 MSLPPPIPPPSLSTPPKVRPTELPIRQIPGTHGWPILGPLSDRLDYFWFQKPENFFRTRKEKYKSTVFRTNIPPTFPFFTNVNPNIIAVLDCKSFSHLFDMDLVDKKDILVGDFVPSVQFTGNIRVGVYQDVSEPQHAKAKNFAMNILKQSSSIWVPELIANLDIFFDQIEATLSKSSSAGYFSPLQQFLFTFLSKVLARADPSLDPKIAESGSSMLNKWLAVQLLPTISIGTIQPLEEIFLHSFSYPYALVSGDYNNLYNFIKQHGKEVIKSGIEFGLSEDEAIHNLLFVLGFNSYGGFSIFLPNLINTIANGPTGLQDQLRKEAREKGGSTLGFSSLKEMELINSVVYETLRLNPPVPLQFGRARKDFQLSTYDSAFNVKKGELLCGYQKLVMRDPVVFNEPDQFIPDRFTKEKGAELLNYLYWSNGPQNGSPSVSNKQCAGKDIVTYTAALIVAHLLRRYDLIKGDGGSITALEKAK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03671 480 Pfam Cytochrome P450 318 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03671 480 Gene3D Cytochrome P450 23 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03671 480 PANTHER CYTOCHROME P450 26 23 463 - -
Trre12g03671 480 PRINTS E-class P450 group IV signature 442 460 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03671 480 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03671 480 PRINTS E-class P450 group IV signature 379 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03671 480 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03671 480 FunFam Allene oxide synthase, chloroplastic 23 480 - -
Trre12g03671 480 SUPERFAMILY Cytochrome P450 24 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03671 480 CDD CYP74 57 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03671 Trre-Chr12 52605272 52611005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03671 101 480 Cytochrome P450 AT4G15440 59.375 1.63e-167 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03671 K10528 - gmx:100784395 734.947