Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03527 ATGACTTTTGAAATTTCAGAATGGTTACAAAATTCCACACCCATTATCACAATCTTCAACGTCATGTTTTTCACTTTCACACTCCTCTTCTCCATCTTCTCATTCCTCATCTTCATCTCAAGAATAAAACCATGGTGCAACTGCAACATTTGTAGTGGCTACCTAACAATGAATTGGACCAAAGAGTTCATAAACCTTAGTGATTGGTACACTCACCTTCTCAAAAAATCACCAACCGGAACCATCCATATCCATGTGCTTAATAACACCATCACATGCAACCAACAAAACATAGAACATATTCTCAAAACACGTTTTGAAAATTATCCTAAAGGAAAACCCTTTTCCGCAATCCTCGGCGATCTTCTCGGTAACGGTATATTTAACGTCGACGGTGTTTTATGGCACTTTCAACGTAAAATGGCGAGTCTCGAACTCAAGAGTGTAACGGTACGTTCTTATGCTTTAGAAATAATCATCGAAGAAATTCATACGAGACTCGTCCCTTTCATGAAATCATTCGCACATGCCGAAAAAGTTTTCGACTTACAAGACATCATGAGACGCTTCTCGTTCGATAACATATGTAAATTCTCGTTCGGGTGGGACCCGAGGTGTCTTCAAGTATCGTTACCCGTTTCGGATTTAGCCAATGCATTTGATGCAGCTTCGAAGATTTCAGCTCGACGTGCATTGTCAACATCGTCGTTGATTTGGAAAATCAAACGGTTTTTCAATATCGGCTCAGAGAAGAATCTTAAAGAAGCAATCAGCGTAGTGAACAAATTAACGGACAAGATCATTAACAAGCGTAAGGAAATTGGTTTTTCAGCTAAGAATGATCTTCTTTCGAGGTTTATGTGTTCGGTAAACGATGAAAAATATATAAGAGATATAGTTGTGAGTTTTTTATTGGCTGGTCGTGACACGGTGGCAGCGGGTTTAACATGTTTGTTTTGGTTATTATCGAAGAACCAAGAAGTGGAGAAAATGATTCGAGAGGAGGTGACCCGGGTAATAATAAACCCGGATCAGGAATACCCGAGTTTTGAAGAGATTCGGGAAATGCATTACTTAAATGCTGTCGTTTATGAAACAATGAGACTTTACCCTCCGGTTCAATTTGATTCAAAGTTTGCAAAAAAAGATGATGTGTTACCAGATGGGAGTTATGTCAGAAAAGGGAGTCGGGTGACTTATCACCCGTATGCAATGGGTCGGATGGAGCGGGTTTGGGGATCCGATTGTGAGGAGTTTAAACCGGAAAGGTGGTTGAAAGATGGAATTTTTGTGAATGAGAGTATGTTTAAGTATCCTGTTTTTCAAGGTGGTGTTAGGGTGTGTTTGGGGAAAGAATTGGCTATAATGGAAATAAAATGTGTTGTTGTTGCTTTGGTTAGAAGATTTGAGATTCGGGTTGATGGAAATCAGGAGCTTCGATTTAGTCCGGGTCTTACTGCCTCTTTGAAGGATGGGTTGCCGGTTCGGGTCTTTGAAAAATAA 1503 0.3992 MTFEISEWLQNSTPIITIFNVMFFTFTLLFSIFSFLIFISRIKPWCNCNICSGYLTMNWTKEFINLSDWYTHLLKKSPTGTIHIHVLNNTITCNQQNIEHILKTRFENYPKGKPFSAILGDLLGNGIFNVDGVLWHFQRKMASLELKSVTVRSYALEIIIEEIHTRLVPFMKSFAHAEKVFDLQDIMRRFSFDNICKFSFGWDPRCLQVSLPVSDLANAFDAASKISARRALSTSSLIWKIKRFFNIGSEKNLKEAISVVNKLTDKIINKRKEIGFSAKNDLLSRFMCSVNDEKYIRDIVVSFLLAGRDTVAAGLTCLFWLLSKNQEVEKMIREEVTRVIINPDQEYPSFEEIREMHYLNAVVYETMRLYPPVQFDSKFAKKDDVLPDGSYVRKGSRVTYHPYAMGRMERVWGSDCEEFKPERWLKDGIFVNESMFKYPVFQGGVRVCLGKELAIMEIKCVVVALVRRFEIRVDGNQELRFSPGLTASLKDGLPVRVFEK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03527 500 CDD CYP86A 78 493 - -
Trre12g03527 500 SUPERFAMILY Cytochrome P450 64 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 Pfam Cytochrome P450 80 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g03527 500 PANTHER CYTOCHROME P450 37 494 - -
Trre12g03527 500 Gene3D Cytochrome P450 53 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03527 Trre-Chr12 50958497 50959999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03527 36 500 Cytochrome P450 AT2G27690 59.831 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03527 K20624 - gmx:100813091 686.797