Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03497 ATGGCTACTACTAGAATTATCACTAGTTTTCTTGTCATATTGGTGCTCCTAGGCACAATATGTGATGCACAATTGACATGTACATTTTATGATAGTACATGCCCCAATGCACTTAGCACAATTAGGATTGCGATTCGAACTGCAATTTCTAAAGAGCGTCGTATGGCTGCATCTCTGATTCGCCTTCATTTTCATGATTGCTTTGTTCAGGGGTGTGATGCATCAATTTTGCTGGATGATAGTTCCACAATCGAGAGCGAAAAGAGTGCACGTCCGAATATTAACTCAGTACGGGGATTTGAAATTATTGATAAAGCAAAATCTGAGGTGGAGAAAGTATGTCCAGGAATTGTGTCTTGTGCAGATATAGTAGCTGTAGCAGCACGTGATGCATCATTCGCCGTTGGTGGTCCTTCATGGACAGTGAAACTTGGACGAAGAGACTCCACAACAGCAAGCAAAAGTTTGGCAAATACAGACCTTCCATTATTTACAGACGATCTTAAAACTCTTATCTCTCGTTTTACAAACAAAAATCTCACTCCTAGAGAAATGGTTACTCTATCTGGTGCGCATACAATTGGACAAGCTCAGTGTTTCACATTTCGTGGCAGGATATACAACAATGCAAGTGACATAGATGTTGGATTTGCTAGAACTCGTCAACGTGGTTGTCCATCGTCTAGCACTACCGCAAACGATCAAAAGTTGGCGGCACTAGATTTGGTGACACCAAATTCTTTTGACAACAACTACTTTAAGAATTTAATTCAAAAGAAGGGTCTTCTTCAATCTGATCAAGTTCTGTTTAGCGGAGGATCTACTGATTCTATTGTTTCAGAATACAGCAAAAATCCTACAACTTTTAAGTCAGACTTTGCAGCTGCTATGATTAAGATGGGAGATATTGAACCCTTAACTGGATCGGCTGGAGTCATAAGGAGCGTCTGCAGTGTTGTCAACTAG 966 0.4048 MATTRIITSFLVILVLLGTICDAQLTCTFYDSTCPNALSTIRIAIRTAISKERRMAASLIRLHFHDCFVQGCDASILLDDSSTIESEKSARPNINSVRGFEIIDKAKSEVEKVCPGIVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTTASKSLANTDLPLFTDDLKTLISRFTNKNLTPREMVTLSGAHTIGQAQCFTFRGRIYNNASDIDVGFARTRQRGCPSSSTTANDQKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSEYSKNPTTFKSDFAAAMIKMGDIEPLTGSAGVIRSVCSVVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03497 321 PANTHER PEROXIDASE 72-RELATED 21 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 Gene3D - 28 321 - -
Trre12g03497 321 Gene3D Peroxidase, domain 2 162 300 - -
Trre12g03497 321 FunFam Peroxidase 162 300 - -
Trre12g03497 321 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Trre12g03497 321 FunFam Peroxidase 28 169 - -
Trre12g03497 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Trre12g03497 321 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
Trre12g03497 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03497 321 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03497 Trre-Chr12 50611881 50613200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03497 10 321 Peroxidase AT1G14550 69.427 5.60e-159 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03497 K00430 - gmx:100786161 541.191