Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03483 ATGCGAGTTTCTACTCTGATGGGACCCAGGAAAGCTAAAAACCAACACACGGCAAGCAAGAAGCAACGCACTTGTGCAGCAAGTTCCTTAGGGCCAGTAGAGGAATTTGATACTCAGAGTGGAAAAGCAAGAAGTCTTGAGGCTGATGACTTAAGGGATCACTTGGCCGGTTTTGCTAAACAATTGAATAAGGCAAGACAAATGATATTTCCTCCTAATAGGAAACAATCAAAACTTGAACTATTGCTCCCATGTTTGTTAGAGGTTGTGGCCAAAGATCACAAGATGATACTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAACAACAACGTCTTGAAATGCAACAAGAGACAGAAAAGATTGCTGAAGAGGCAGCAGAACAAACGCATCTTGCTGAAGTAAGCAATGTTGAAGAGGCAGCAGAACAAATTGTGGAAAAAGAACACGAAGAAGCTGAAGAGCGTAGAAAACTGGAGTTGTTTTTTACTAAACAAACAACTCCGGAAGAGACAAGAAATGAAGAAATGGCAGAAATTAGCTACAACCATGGATTATTTGGAAAAAGCAAAGAGAGAAGAGGTTGCTCTACTTATCGAAGCGGCATATCAACAACAAGAGGTTGA 636 0.4041 MRVSTLMGPRKAKNQHTASKKQRTCAASSLGPVEEFDTQSGKARSLEADDLRDHLAGFAKQLNKARQMIFPPNRKQSKLELLLPCLLEVVAKDHKMILARKSIIEKRKEEQEQQRLEMQQETEKIAEEAAEQTHLAEVSNVEEAAEQIVEKEHEEAEERRKLELFFTKQTTPEETRNEEMAEISYNHGLFGKSKERRGCSTYRSGISTTRG 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03483 211 MobiDBLite consensus disorder prediction 143 181 - -
Trre12g03483 211 MobiDBLite consensus disorder prediction 1 42 - -
Trre12g03483 211 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 42 163 IPR027512 GO:0005852
Trre12g03483 211 Coils Coil 141 161 - -
Trre12g03483 211 Coils Coil 99 131 - -
Trre12g03483 211 MobiDBLite consensus disorder prediction 144 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03483 Trre-Chr12 50499745 50502377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03483 46 136 Eukaryotic Initiation Factors Gene Family AT4G11420 54.082 1.13e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03483 - - gmx:100803796 97.4413