Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03402 ATGGCCACCTTTATTAAATTATTTGTTACACTCTCTATTCTATCTCTCTTAGCTTGTTCTAGCAATGCACAACTTTTTCCTAACTTCTATGGCAAAACCTGTCCTAACCTTCAATCCATTGTTCGTACTGAAATGATCAAAGCTATCAATAATGAAGCTAGAATTGGTGCTTCTATACTTCGCTTGTTCTTCCATGATTGCTTTGTCAATGGATGTGATGGATCTGTACTATTAGATGACATTGGCACATTTGTTGGTGAAAAAAATGCTGGGCCTAACAAAAATTCAGCTAGAGGTTTTGAAGTGATTGATACCATTAAAACCAAAGTTGAAGCTGCTTGCAAATCCAAAGTGTCATGTGCAGATATTCTTGCACTTGCAACTAGAGATGGAATAGTCTTGCTTGGAGGACCCTCATGGACAGTACCACTTGGAAGAAGAGATGCAAGAACAGCAAGCCAAAGTGCAGCCAACACCCAAATCCCATCACCATCATCTGACCTTAAAACCCTCACCAAAATGTTTAAAGACAAAGGTCTAACATTAAAAGACCTTACTGTCCTTTCTGGTGCACACACCATAGGTCAAACAGAATGTCAATTTTTCAGAACTCGCATATACAATGAAACCAACATTGACAGAAACTTTGCCACCTTAAGAAAAAGAAACTGCCCTACCTCTGGTGGTGACACCAACTTGGCACCTCTTGATTCTGTCACTCCAACTAAGTTTGATAACAATTACTATAATGACCTTATTGCTAAAAAAGGACTTCTTCATTCTGATCAAGTTCTTTTCAATGGTGTTGGTTCTCAAGTTTCTTTGGTTAAGACTTATAGTACTAATGGTAATGCTTTTGCTAGAGATTTTGCTGCTGCTATGGTGAAATTGAGTAAAATTAGTCCTCTAACTGGAACTAAAGGAGAGATTAGAAAGAATTGCAGATTTGTTAATTGA 957 0.3762 MATFIKLFVTLSILSLLACSSNAQLFPNFYGKTCPNLQSIVRTEMIKAINNEARIGASILRLFFHDCFVNGCDGSVLLDDIGTFVGEKNAGPNKNSARGFEVIDTIKTKVEAACKSKVSCADILALATRDGIVLLGGPSWTVPLGRRDARTASQSAANTQIPSPSSDLKTLTKMFKDKGLTLKDLTVLSGAHTIGQTECQFFRTRIYNETNIDRNFATLRKRNCPTSGGDTNLAPLDSVTPTKFDNNYYNDLIAKKGLLHSDQVLFNGVGSQVSLVKTYSTNGNAFARDFAAAMVKLSKISPLTGTKGEIRKNCRFVN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03402 318 FunFam Peroxidase 162 297 - -
Trre12g03402 318 Gene3D - 28 315 - -
Trre12g03402 318 Gene3D Peroxidase, domain 2 162 297 - -
Trre12g03402 318 Pfam Peroxidase 41 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PANTHER PEROXIDASE 72-RELATED 20 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Trre12g03402 318 FunFam Peroxidase 28 174 - -
Trre12g03402 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Trre12g03402 318 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Trre12g03402 318 CDD secretory_peroxidase 24 317 IPR033905 GO:0004601|GO:0042744
Trre12g03402 318 SUPERFAMILY Heme-dependent peroxidases 24 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre12g03402 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03402 Trre-Chr12 49588822 49591736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03402 23 314 Peroxidase AT5G05340 62.925 3.36e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03402 K00430 - gmx:100810392 493.041