Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03388 ATGCCGTCGTCGACTCATGATGGTGTTGTCTGCTTTCTTGCTTGCAGAGAAGGAGAAGATCTAGAGAAGTATGCCAAGGATACACCTGGCAGAAGTTTCTATTATGCAATGGAGCCTCTTCACCACATGTGTCTTTTTTTACAGTGGTCGCTGCGTTTGCTATCAGGAAGTTGCCCTTTACCAAAGCCAAGAGATACTTGGAAGATGTTTTGGCCCACAAACAGGATATTCCCTTCAGACGTTTCTGTCACAGTGTTGGTAGGACTGCACAAGCTAAGAATAGACATTCCAATGGGCAAGAATGCTGAGTGTAATGCTGAAGTATGTGAAAGTTTGGATGTGGATGCTCTGTATGTTTCTCATATCCAGGTCAATTAA 378 0.4365 MPSSTHDGVVCFLACREGEDLEKYAKDTPGRSFYYAMEPLHHMCLFLQWSLRLLSGSCPLPKPRDTWKMFWPTNRIFPSDVSVTVLVGLHKLRIDIPMGKNAECNAEVCESLDVDALYVSHIQVN 125
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03388 Trre-Chr12 49371657 49373528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03388 100 125 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 76.923 5.53e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03388 K02880 - mus:103981774 42.743