Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03382 ATGGCTGAAGGATTTTCAAATATGAGGAATCTTGTACTTCTCATATTGTATCATAACAATTTTTCAGGAAATATCAATTTTCTTTCGGACAATCTGCGATATCTTTTGTGGCATGGATACCCTTTTACTTCTTTGCCGTCAAACTTTGAACCATATTATCTTGTGGAATTGAATATGCCTAACTGTAGCATTCAACGACTGTGGGAAGGTCGCAAGGATCTTCCTTATTTGAAAAGTATGGATGTGAGCAACTCCAAGTATCTTACAGAGACTCCTAAGTTTTTTTGGACCCCAAAACTTGAGCGGCTAGATTTCACTGGATGCACAAACTTAACACAGTGTATCAAATTTAAATTCTTTGCGAGTTTACGCCTCTCTGGTTGCACAAAACTTCAAAAGACGCCAGAATTTACAGGGGCATCAAATCTTGAGTACCTTGATATGGATGGATGCATATGTTTATCCACAGTCCATGAATCCATTGGGGTTCTTGCAAAGCTTAGATTCTTGAGTTTAAGGGATTGCATAGTTCTTGCTGGAATGCCCAATAGCATTAATACCATGACTTCTCTTGTAACTTTAGATTTATACGGCTGCTTGAAACTTACAACTCTTCCCCTTGGACAAAAATTCAGTCCTCCTTATATGGAATCTTTGATTTTTCTTGATGCAAGCTTTTGCAATCTTCACCGATTACCTGATGTTATTGGTGAGCTACGATGTTTAGAAAGACTAAGTCTACAAGGAAACAATTTTACGTCACTACCTCCTAATTTCTCTAAGCTTGGAAGTCTGGCATATTTGAACTTGGCTCATTGCCATGAGCTTCAAACTTTTCCACGTATATCTTCACAAAAAAAAAGGTCTCTAGTAGGAGGTTATTTTAAAATAGCATCGGGATCACGTGATCATAGGTCAGGATTACATGTATTTGACTGCCCCAAATTGAAGTTCACGCTATTGGATAACCATGAATATTTTAGTGACCTTCTCTGTAAATGGTTAGAAAGACTTCTTAAGGAACCCCGCCACTTTCGGTGTGGCTTTGACATTATTGTTCCTTGGAATTGGGAAAATATTGATCAACCATTAACTTATCTTATTCCAGAGTGGTTCCATTACCAATTTAGTGGGCGTTCAGTTATAAGGATAGTAAAGTCTAATGTTGATGACAACTGGGTTGGATTTTCCTTTTGTGTAGTATTTGAGAGCATTGCCAGGTTTGGTGATAGAGAAATGGGGAATGTGCATGTTAATCAAAAAGGCAGGTTTGATCATGTGGAAGAAAATATCAGCAGTTCTGGACCTAAAATTCAGCTTCCCTATAATTGGCCTTTAATTATGCCAACCACAGCCAAAATACCCAATGTCTTCCTTCAGCCTCGAGTTCGGCTAGCTTGGATCTCTAAGTCAACACAAGGGTCGTTTTGGCTCCTTATCTGCTGTGTTAGCTTGTCAAATAGTACCAATAATGAGGTTAAGGTTCTGTCATGA 1494 0.3835 MAEGFSNMRNLVLLILYHNNFSGNINFLSDNLRYLLWHGYPFTSLPSNFEPYYLVELNMPNCSIQRLWEGRKDLPYLKSMDVSNSKYLTETPKFFWTPKLERLDFTGCTNLTQCIKFKFFASLRLSGCTKLQKTPEFTGASNLEYLDMDGCICLSTVHESIGVLAKLRFLSLRDCIVLAGMPNSINTMTSLVTLDLYGCLKLTTLPLGQKFSPPYMESLIFLDASFCNLHRLPDVIGELRCLERLSLQGNNFTSLPPNFSKLGSLAYLNLAHCHELQTFPRISSQKKRSLVGGYFKIASGSRDHRSGLHVFDCPKLKFTLLDNHEYFSDLLCKWLERLLKEPRHFRCGFDIIVPWNWENIDQPLTYLIPEWFHYQFSGRSVIRIVKSNVDDNWVGFSFCVVFESIARFGDREMGNVHVNQKGRFDHVEENISSSGPKIQLPYNWPLIMPTTAKIPNVFLQPRVRLAWISKSTQGSFWLLICCVSLSNSTNNEVKVLS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03382 497 Gene3D Ribonuclease Inhibitor 141 345 IPR032675 -
Trre12g03382 497 Gene3D Ribonuclease Inhibitor 1 140 IPR032675 -
Trre12g03382 497 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 117 208 - -
Trre12g03382 497 Pfam C-JID domain 368 414 IPR045344 -
Trre12g03382 497 SUPERFAMILY L domain-like 3 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03382 Trre-Chr12 49312375 49316507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03382 5 245 WRKY Transcription Factor Family AT4G12020 32.384 3.69e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03382 - - lja:Lj3g3v1556600.1 465.692