Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03361 ATGAAATTGTTTAAGGAAGCAAATACTTCCTCCTACCAAACATTTCTCTTATTATTATTATTGTTGTTTATCTTCTCCGGTTTTGAAATTTGTCACGGACAAGACGATGACCTTGCGGATATTGCGGCACCGCCACCACCACCGGCCGAACTCGACAACTGCAATGGAATATTTCTAACGTACAGTTTAACATCGAGGGAAAAAGAATTTCCGCACGTGAAAAATGTGTCGGCACAGGCGTGGGCGTTTAAAGCGGAAGCTTCATTGATGAATGTTGGGGATGAGGAATTGAAAGGTTGGCAAATGTATATTGGGTTTCAGCATAGGGAGATTCTTGTTTCGGCCGACGGGGCTGTTCCGGTTGACGCGGAGGATTTTCCGGCTGAGGTAGGAAATGGGACTACACTTGCTGGGAGTTCTGCGACGGATTTGAGGACTGCGATCGAAACGGCTGGTGATTATACTCAAATGACTGTTCGGGTTCAGATGAGTGGAACTCAGTTTGGACTTGGTGCTGGTGGTAAACCTATGCCTAAAACTATCAAGCTTGTTAACGATGGCTTCAAATGTCCCCCAGCTAGTCGTCAAGGTTCAAGAATGTTTGTATGCTGCAAAAAGGATCCAAAATTCAAAGCCAAACTTGCCAAGAAAACAAAGTTCCTTCCTCGTCGCTATGGCGACCTAACCATAGCATACGACGTACTTCAATCCTTCAAAACCAGCTACTTCGTACAATTAACCATAGATAACAATCATCCATTAGGTCGTCTCGATCATTGGAACATAACATGGGAATGGCAAAAAGGCGAGTTCATTAACACGTTAAAAGGTGCTTACGCTCGCATAAAAGACCCTTCTGAATGTTTATATGGTCCTGCTGGAAGATACTATGGTGACTTAGATTTCTCACAAGTTGCAAACTGTCAAAAAAAGCCTATTCTCTCTGATCTTCCAGCTGAAAAAGCCGAAGATGAAAAAGTTGGTAAATTACCTTGGTGTTGTAGGAATGGTACTGTTTTACCACCTATTATGGATAAGAATAAAGCAAGATCAATTTTTCAGATGCAAGTTTTTAAAATTCCACCTGATGATAACAGAACAGCAATTACACCACCATTGAAATGGCACATTGATGGTGTTATTAACCCTAAATACACATGTGGACCACCAATTAGGGTTGATCCACAACAGTTTCCTGATCCAAGTGGACTTAGAGCAATTTCAACAGCTTTTGCCAGTTGGCAAATAGTTTGCAATATGACAAAACCGAAGCCAAAAGAAAATCGTTGTTGTGTTTCGTTCTCGGCTTTCTATAATGAATCTGCTATCCCTTGTAACACATGTGCATGTGGTTGTGATGATACAAGAAAGTGTAACGCCAATGCTCAACCTTTACTTCTTCCACCTGACGCGCTTCTTGTCCCTTTTGTGAATAGAACATTAAAGGGGCGAGCGTGGGCGAAACTCAAACACATGCGTGTTCCGAGTAAGTTACCTTGTGGAGATAATTGTCCTGTTAGTATTAACTGGCATGTTAGTTCTGATCATAAGGAAGGATGGACGGCTAGGATGACACTTTTCAATTGGGAAGATTTCTCTTTTGATGATTGGTTCACTGCAATTAAGTTTGATAGGTCTTTTGAAGATTTTCAAGATGTTTACTCGTTTAATGGAACGAGAATCCCCGGTATCAAAACCATTTTCTTTCAAGGACTTAAAGGTTTGAATTACTTAGCAGGAGAGACTAACGGAACTCGTGTTGGCGATCCAAGGGTGCCAGGAAAACAACAGACTGTGATTTCTTTTCATAAGAAACACATGAAAGATTTCAATGTTGTGCGCGACGCTTTTCCTTCTAAGGTTTACTTCAATGGAATGGAATGTGCATTACCTCCACATAGACCTGCTAAAAGTTTAGGGCATAAATCTTCTATCAGTGTCATTGCAGTCATTTTCACAGCTTTTATGACATTCTTGCTCATGACAGATCGCTTTTTCTGA 2001 0.4118 MKLFKEANTSSYQTFLLLLLLLFIFSGFEICHGQDDDLADIAAPPPPPAELDNCNGIFLTYSLTSREKEFPHVKNVSAQAWAFKAEASLMNVGDEELKGWQMYIGFQHREILVSADGAVPVDAEDFPAEVGNGTTLAGSSATDLRTAIETAGDYTQMTVRVQMSGTQFGLGAGGKPMPKTIKLVNDGFKCPPASRQGSRMFVCCKKDPKFKAKLAKKTKFLPRRYGDLTIAYDVLQSFKTSYFVQLTIDNNHPLGRLDHWNITWEWQKGEFINTLKGAYARIKDPSECLYGPAGRYYGDLDFSQVANCQKKPILSDLPAEKAEDEKVGKLPWCCRNGTVLPPIMDKNKARSIFQMQVFKIPPDDNRTAITPPLKWHIDGVINPKYTCGPPIRVDPQQFPDPSGLRAISTAFASWQIVCNMTKPKPKENRCCVSFSAFYNESAIPCNTCACGCDDTRKCNANAQPLLLPPDALLVPFVNRTLKGRAWAKLKHMRVPSKLPCGDNCPVSINWHVSSDHKEGWTARMTLFNWEDFSFDDWFTAIKFDRSFEDFQDVYSFNGTRIPGIKTIFFQGLKGLNYLAGETNGTRVGDPRVPGKQQTVISFHKKHMKDFNVVRDAFPSKVYFNGMECALPPHRPAKSLGHKSSISVIAVIFTAFMTFLLMTDRFF 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03361 666 Pfam COBRA-like protein 242 421 IPR006918 GO:0010215|GO:0016020
Trre12g03361 666 PANTHER COBRA-LIKE PROTEIN 7 12 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03361 Trre-Chr12 49193485 49196548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03361 18 663 COBRA Gene Family AT3G20580 61.280 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03361 - - gmx:100789175 1046.96