Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03278 ATGGCTTCTGAGAATGAATCAACAAAGTTACCCTTTAATGGTGAAACTGGAAATGTAAGAAACAAAGTTAGAAGAAACGGAAAAGGACCTAACAAAACACCACAAAGAGGTGTTGGAATTGAAAAACTTGAGAAAATGAGAATACAAGAATCATTAAAACCTTTTCATCAACAACAACAACAACTTCTTTTCACCAGCTATGGTGGTGCATTTCATCACTTTCCTCAACAACAACAACAACAACAACAACAACAACAACAAGTGATGATGATCAACAACAACAATAACAATATCAACAATGTTGTTTGTTCTGGTTTTCCCGGTTCTTGTTTTAGTCCTTTTGTTGGATCAGCTTCTTCTTCATCTTCTTCTTCTTCTAATGGTTTTGGTTGGGTTTTTAGAAACCCTTTTGAGAACTCTTCTAAAGAACTCTCTTCAATCCCAAATCTCAATCATCATCAATCTCTTGATCTTTGTCTCAAGAAAACTCGTTTGAATGAGGAGAATATAATGATGAGAGGAACAAATTCAAAGAGAGAAATGCCTTTGGAGATTTGGAATAAGCATCATCCTGTTCATCATAATTTTCTTGGAATTATGCCTCAAGCTTCTGTTTCTGCTTATCCAACTCAAAATCTTGATGAGTGTGTGGAGGTTGTAGCTGTTCATAGGAAGAGAGATTCTTCATTAGGGAGTGGAAGAGTTTTCATGGAATATGAATTCTTCCCTAAAAAAGATGGAAAAAGCACTACTACTACTACTACTATTGGCTCTGGTGAAGCTTCTTCTTCCATCACTGTTACATCTGATGGAGATACTTCAACTGCTTATGATTCAGTTGATTTATCTCTTAGACTTTGA 861 0.3542 MASENESTKLPFNGETGNVRNKVRRNGKGPNKTPQRGVGIEKLEKMRIQESLKPFHQQQQQLLFTSYGGAFHHFPQQQQQQQQQQQQVMMINNNNNNINNVVCSGFPGSCFSPFVGSASSSSSSSSNGFGWVFRNPFENSSKELSSIPNLNHHQSLDLCLKKTRLNEENIMMRGTNSKREMPLEIWNKHHPVHHNFLGIMPQASVSAYPTQNLDECVEVVAVHRKRDSSLGSGRVFMEYEFFPKKDGKSTTTTTTIGSGEASSSITVTSDGDTSTAYDSVDLSLRL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03278 286 PANTHER OS01G0212500 PROTEIN 13 286 IPR040356 GO:0003700
Trre12g03278 286 MobiDBLite consensus disorder prediction 1 15 - -
Trre12g03278 286 MobiDBLite consensus disorder prediction 246 275 - -
Trre12g03278 286 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03278 Trre-Chr12 47930623 47932305 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Trre12g03278 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03278 - - psat:127083177 167.162