Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03269 ATGTATTCCGAACCAGAATTTCCAATTCCAAGTAGGAAGGATTTGGAAACCATCAAGTACTACTTCGACAACGAAACAGAGTTCATGGCTGCAACAAACTTCTTCAACGACGATCGGAACATTCTTATTCGCAGAAATGCCGTTTCAATAATCGCTAAGGTGACAAAGAAGATTGATCCAGATGCATTTGTTCCGTATCGTGCTATGAACTACTTTGATCGCTTCTTATCCCGTTACAACATGACGGATGTGGAAGGTCGGACTGATACCGAAAAAGTTAATTTGATTGCTATATCTTGTTTCACCATATCTGCCAAGATGTGGATAGACTCATTCTCGGTTGACCAGTTTTTGTCTGACCTAAATAGGGACATGAATCTGAGGATAAGTCATGACATGGTAATGAGAATGGAGTTTCTCATTCTACAAGTACTTAGCTGGAAAATGAAATCTGTGACTGCCTTCTGTTTTCTGAACCACTATTACCCTCACTTCAGACAATTCCGTGGTTTTAAACGCCGTAGCATTAATGAGATCATAGTTCAAGCACAAGGAGAGCACACCTTTGTTGACTTCATGCCTTCACACATTGCATTCTCCGCTTTTCTGGCTGCTGCCAAAATTGCATATCCCTTAAAGTATATGGAAATTGCAGAAGACATTGAAAGCAAACTTAACGATCAAGGACAGGTGAAGGAATGTGCAGAGAAGATGATAGATCTTTGCAGAAGGCTGAACATCCTGATTGATACCCCTAGATCAGGAATTCACTCTGCTTCAAGTGAAGCCGTGGCAGTACCCCAAAAGGAAACCAAAGATAAAGCGGTGGTGGTCGATGATTCATCCGAAGAAGAAGAAGGGACTGCGTTAATCGACAAGCGAAGACAGGACATAGGCAAGATGGAGACTTCTCAATTGCAGGTGCAGGAGGGGCCGGAGAAGTTATCCAATAAAAAAGATGTATCAGCAGAAGAGACTAAGGTATCCATTTCAGAGATTGAAGAGGACCTTGTAGAACCAAAGAAGCTAATGAACTTTGAGCTGAAGTGGGCCACTGATGTTCCACCACTAGAAGCGCAGCCACAAGAGTCTATAACTATAAGCTTTAGGATACCAGGGACCGGAAAGAATATAAATTTAGGCTGTTGTACCTGCAACATCAGTTAG 1167 0.4207 MYSEPEFPIPSRKDLETIKYYFDNETEFMAATNFFNDDRNILIRRNAVSIIAKVTKKIDPDAFVPYRAMNYFDRFLSRYNMTDVEGRTDTEKVNLIAISCFTISAKMWIDSFSVDQFLSDLNRDMNLRISHDMVMRMEFLILQVLSWKMKSVTAFCFLNHYYPHFRQFRGFKRRSINEIIVQAQGEHTFVDFMPSHIAFSAFLAAAKIAYPLKYMEIAEDIESKLNDQGQVKECAEKMIDLCRRLNILIDTPRSGIHSASSEAVAVPQKETKDKAVVVDDSSEEEEGTALIDKRRQDIGKMETSQLQVQEGPEKLSNKKDVSAEETKVSISEIEEDLVEPKKLMNFELKWATDVPPLEAQPQESITISFRIPGTGKNINLGCCTCNIS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03269 388 MobiDBLite consensus disorder prediction 271 300 - -
Trre12g03269 388 Gene3D - 31 150 - -
Trre12g03269 388 Pfam Cyclin, N-terminal domain 17 149 IPR006671 -
Trre12g03269 388 SUPERFAMILY Cyclin-like 131 247 IPR036915 -
Trre12g03269 388 Gene3D - 23 237 - -
Trre12g03269 388 SUPERFAMILY Cyclin-like 14 149 IPR036915 -
Trre12g03269 388 PANTHER CYCLINS 19 253 IPR039361 -
Trre12g03269 388 MobiDBLite consensus disorder prediction 271 322 - -
Trre12g03269 388 Pfam Cyclin, C-terminal domain 152 243 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03269 Trre-Chr12 47851028 47853418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03269 14 214 Core Cell Cycle Gene Families AT4G03270 31.455 1.99e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03269 - K18812 tpra:123896490 609.757