Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03184 ATGGAGAAGAAATCAATTGCTGCCTTGTCCTTCCTCCTCCTCGTTCTCTTTGTTGCACAAGAAATTGTAGTGACTGAGGCACAAAACAAATGTGAGCACTTGGCTGATACATATAGAGGACCATGCTTCACTGATGCTAGCTGTGATGATCACTGCAAGAATAAAGAGCATTTTCGTAGTGGCACTTGCCATAGCTTTCGTTGTTGGTGCACTCATCAAAACTGTTAA 228 0.4254 MEKKSIAALSFLLLVLFVAQEIVVTEAQNKCEHLADTYRGPCFTDASCDDHCKNKEHFRSGTCHSFRCWCTHQNC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03184 75 SUPERFAMILY Scorpion toxin-like 30 72 IPR036574 -
Trre12g03184 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 71 - -
Trre12g03184 75 SMART gth_4 30 74 IPR003614 GO:0006952
Trre12g03184 75 CDD Knot1 40 71 IPR003614 GO:0006952
Trre12g03184 75 Gene3D - 29 75 IPR036574 -
Trre12g03184 75 Pfam Gamma-thionin family 31 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03184 Trre-Chr12 46404803 46405541 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03184 1 71 Plant Defensins Gene Families AT5G63660 42.466 7.27e-10 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03184 - K06233 gmx:100779239 112.079