Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03131 ATGAAGCTTCATAAACATATTTGCTTATTCTTGTTTCTCTTTAGTATAATTTCAAGCTCACAAGCCTATACATTCTATGTTGGTGGAAAAGATGGATGGGTTTTGAACCCCTATCAAAGTTACAATGAATGGACGGGGAAGAATAGGTTCCAAGTCAATGATATTCTTGTTTTTAAGTACAAGAAGGACTCAAATTCAGTGTTGGTGGTAAACAAAGAGGATTATGATAAGTGCAACAAGAAGAATCCAATCAAGAAATTTGATGATGGTGATTCTGAGTTCCAATTGGATAGATCAGGTCCATTTTATTTTATTAGTGGAAAAGATGATAATTGTGAAAAAGGTCAGAAATTAATTGTTGTGGTTTTGGCTGTGAGAAAAACATCTCCTCCCCATGTTCCAATTAATCCACCAAATGTTCCTTATACACCTCCCAAAAGTACTCCTTCACCAGGCAATCAACCTCCGTATGTTCCAATTACACCTTCTCCTGTTCACAATCCTCCTAGTGTTCCTTATACTCCTCCAAAAACACCTTCTCCTGGATATGAGCCACCTTATGTACCAATTGCACCACCAAAAACAACTCCTATTCACACCCCTCCTAGTGTTCCTTATACTCCACCAAAAGTTCCTTCTCCTGGAAATGAACCACCATATATACCAATAATAACACCACCAAAAACTCCTCCTCACGCCCCTCCTAGTATTCCATACACTCCTCCGAAAGCTCCTTCTCCCGGGAATGAGCCACCATATGTACCAATTACACCACCAAAAACACCTTCTCCTATTCATACCCCTCCTAGTGTTCCATATACTCCTCCAAAAACTCCTCCTATTTATACCCCTCCTAGTGTTCCTTATACTCCTCCAAAAGCACCTTCTCATGGGAACCAACCACCGTATGTTCCAATTATGCCACCAAAAACACCTTCTCCAATTCACACCCCTCCTAGTGTTCCTTATACTCCCCCAAAAGCACCTTCTCATAGAAACCAACCACCGTATGCACCAATTACACCACCAAAAACACCTTCTCCTATTCACACCCCTCCTAGTGTTCCTTATACTCCTCCAAAAACACCTTCTCCTGGTAATCAACCGCCCTATGTACCAATTACACCTCCTAAAACACCTTCTCCTATTCAAACCCCTCATAATGTCCCATATACTCCCCCAAAAGCGCATTCTCCTGCGAACCAACCACCGTATGTACCAATTACACCACCAAATACACCTTCTCCTAGTGTTCCTTATACTCCTCCAAAAACACCTTCTCCTAGTAATCAACCACCATATGTACCAATTACACCTCCAAAAACACCTTCTCCTATTCACACTCCTCCTAATGTTCCTTATACTCCTCCAAAAACCCCTTCTCCAAGAAATGAACCACCTTATGTACCAATTACACCTCCAGAAAATGCTTCTCCTATTCACACCCCTCCTAGTGTTCCTTATATTCCACCAAAAGCTCCTGCTCCTGGAAACGAGCCACCATATGTTCCAATAACACCACCAAAAACTCCTCCTATTCATGCTCCTCCTAATGTTCCTTATACTCCACCAAAAACTCCCTCTCCTAGCAATCAACCACCATATGTACCAGTTACACCACCAAAACCCCCTTCTCCTATACATGCCCCTCCTAATGTTCCTTATACTCCTCCAGAAGCTCCTTCCCCTAAAAATCAACCACCTTATGTTCCAATTCCACCTCCAAAAACTCCTTCCCCTACCTCTCATCCTATTCCTCCTAGTATTGCTCCTTACACTCCCCCTAAAACTCCATCCCCTAGAAATCAACCGCCTTATGTACCAATTACACCGCCAAAATCTCCTTCTCCTATTCAAACCCCTCCTAATGTTCCTTACACACCTCCAACAACTCCTTACCCTAGCAATCACCCTCCAAATGTTCCAACAACACCCTCTCCTATTTCTCCACCTCCATATGTTCCAACACCTCCAAAAACACCTTCTCCGATTTCTCAAGCACCTTACATTGTAACACCTCCCAACAATCCAATAGCTCCTTCCCCAAGCAATAACCCCCCAAATGTACCAAAACCTCCAAAAACACCTTCTCCTATTTCTCAACCTCCATATGTACCAACACCTCCAAAAACTCCTTCTCCCATTTCTCAAGCTCCATACATTCAAACACCACCAAACACACCTTCACCAACATCACAACCACCATACATTCAAACTCCTCGAAGCACTCCTTCTTCGCCAACATCGCAACCGCCTTACATTTCAACACCTCCAAAGAGTACTCCTTCTCCATCTTCTCACACACCTCGAGGCGCTCTTTCTCCAATATCACAACCTCCATATATCCAAGCACCACCAAACTCTCATTCACCAACATCTCAACCACCTTACAGTCAAACTCCACCAAGCACCTCTTCTCCGTCATCTTCTCCATCATCAGCACAAACTCCTTCTGGAAGTGGAATATCACCATCTCCACTATCTCCATATCCATCCAACAACTCAACATCACCTTCAACTTCACCTTCAGCGAGTTCACCGTCGTCAACCACTGCTTCACCTCCGGCTCTCACTCCTGCGAGTTCTCCGGCGTCAACCACTACTTCACCTCCAACTCTTACTCCAACGGGCTCTCCAGTGTCAGCCACTACTCCAACAACATCTCCTGTGGGGTCTCCTCTAACAGCATCAACTCCATCACCATCATCAATTGTCCCTGGAACACCAAAAAGTCTATCACCATCGTCCACCCCTGCAGGAACACCTTCTGCATCGAATGAAACGTCAGCAGGGCGGACAACAAGCGGAGTATCGTCTGCAAGTCCATGGGGGATATGGACTTACTCCATTACGATTTTGGCCGGTGCTGCACTCACTAGTACTATTCTTGGATAG 2895 0.4428 MKLHKHICLFLFLFSIISSSQAYTFYVGGKDGWVLNPYQSYNEWTGKNRFQVNDILVFKYKKDSNSVLVVNKEDYDKCNKKNPIKKFDDGDSEFQLDRSGPFYFISGKDDNCEKGQKLIVVVLAVRKTSPPHVPINPPNVPYTPPKSTPSPGNQPPYVPITPSPVHNPPSVPYTPPKTPSPGYEPPYVPIAPPKTTPIHTPPSVPYTPPKVPSPGNEPPYIPIITPPKTPPHAPPSIPYTPPKAPSPGNEPPYVPITPPKTPSPIHTPPSVPYTPPKTPPIYTPPSVPYTPPKAPSHGNQPPYVPIMPPKTPSPIHTPPSVPYTPPKAPSHRNQPPYAPITPPKTPSPIHTPPSVPYTPPKTPSPGNQPPYVPITPPKTPSPIQTPHNVPYTPPKAHSPANQPPYVPITPPNTPSPSVPYTPPKTPSPSNQPPYVPITPPKTPSPIHTPPNVPYTPPKTPSPRNEPPYVPITPPENASPIHTPPSVPYIPPKAPAPGNEPPYVPITPPKTPPIHAPPNVPYTPPKTPSPSNQPPYVPVTPPKPPSPIHAPPNVPYTPPEAPSPKNQPPYVPIPPPKTPSPTSHPIPPSIAPYTPPKTPSPRNQPPYVPITPPKSPSPIQTPPNVPYTPPTTPYPSNHPPNVPTTPSPISPPPYVPTPPKTPSPISQAPYIVTPPNNPIAPSPSNNPPNVPKPPKTPSPISQPPYVPTPPKTPSPISQAPYIQTPPNTPSPTSQPPYIQTPRSTPSSPTSQPPYISTPPKSTPSPSSHTPRGALSPISQPPYIQAPPNSHSPTSQPPYSQTPPSTSSPSSSPSSAQTPSGSGISPSPLSPYPSNNSTSPSTSPSASSPSSTTASPPALTPASSPASTTTSPPTLTPTGSPVSATTPTTSPVGSPLTASTPSPSSIVPGTPKSLSPSSTPAGTPSASNETSAGRTTSGVSSASPWGIWTYSITILAGAALTSTILG 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03131 964 CDD OsENODL1_like 23 123 IPR041846 -
Trre12g03131 964 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Trre12g03131 964 MobiDBLite consensus disorder prediction 803 941 - -
Trre12g03131 964 FunFam Early nodulin-like protein 1 22 127 - -
Trre12g03131 964 Pfam Plastocyanin-like domain 34 116 IPR003245 GO:0009055
Trre12g03131 964 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Trre12g03131 964 Gene3D - 21 126 IPR008972 -
Trre12g03131 964 MobiDBLite consensus disorder prediction 779 802 - -
Trre12g03131 964 MobiDBLite consensus disorder prediction 130 941 - -
Trre12g03131 964 MobiDBLite consensus disorder prediction 131 764 - -
Trre12g03131 964 PANTHER BLUE COPPER PROTEIN 22 162 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03131 Trre-Chr12 45664451 45667452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03131 3 147 Phytocyanin Superfamily AT5G53870 54.305 1.39e-50 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03131 - - tpra:123895145 630.172