Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03068 ATGGCAAGCACAAATGTAGTTGTTGGTGTTGGTGAAGAAGCAGAAGAACACAATAATAAGCTGATTCTGTATTCATTTTGGAGGAGTTCATGTTCCTTCAGAGTCCGAATTGCTCTCAACTTCAAAGGCCTCAAATATGACTATAAACCTGTCAATCTCTTGAAGGGAGAACAATCTCATCCTGAGTTTATCCAACTCAACCCTGTTGGTTTTGTTCCTGTTCTCGTCGATGGCCCTGCTGTAATTTCCGACTCTTTCGCCATTATTATGTATTTGGAGGAAAAGTATCCTAAACATCCTTTGCTCCCTACTGACATTCATAAAAGAGCAATCAATTTCCAGGCTGTCAGTATTGTTTCTTCATCAATACAACCTCTTCAAAACTCAAGTCTCCTGAAGTACATAGAGGGAAAAGCTGGCCCTGATGAAAAACTTTCATGGGCCCAGACTGTAATTAAAAAAGGCTTCACAGCTCTTGAAAAGCTATTGAAAGAACACACTGGGAGGTATGCTACTGGAGATGAAGTTTCCATGGCGGATATATTTTTAGCGCCTCAGATACACTCTGCATTTAAGAAATTCAACATTGACATGGGAAATGAGTTCCCAATTCTATCAAGATTACACGAGACGTATTATGAGATCCCAGCATTCCGGGAGGCTTTGCCAGAGAATCAGCCAGATGCACCAGGCTAG 696 0.4124 MASTNVVVGVGEEAEEHNNKLILYSFWRSSCSFRVRIALNFKGLKYDYKPVNLLKGEQSHPEFIQLNPVGFVPVLVDGPAVISDSFAIIMYLEEKYPKHPLLPTDIHKRAINFQAVSIVSSSIQPLQNSSLLKYIEGKAGPDEKLSWAQTVIKKGFTALEKLLKEHTGRYATGDEVSMADIFLAPQIHSAFKKFNIDMGNEFPILSRLHETYYEIPAFREALPENQPDAPG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03068 231 CDD GST_C_Zeta 107 226 IPR034330 -
Trre12g03068 231 Pfam Glutathione S-transferase, N-terminal domain 23 98 IPR004045 -
Trre12g03068 231 PANTHER MALEYLACETOACETATE ISOMERASE 21 229 - -
Trre12g03068 231 FunFam Glutathione S-transferase Z1 19 103 - -
Trre12g03068 231 NCBIfam maleylacetoacetate isomerase 22 229 IPR005955 GO:0003824|GO:0005737|GO:0009072
Trre12g03068 231 SFLD Main (cytGST) 22 210 - -
Trre12g03068 231 CDD GST_N_Zeta 21 93 IPR034333 -
Trre12g03068 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 19 100 IPR004045 -
Trre12g03068 231 FunFam Maleylacetoacetate isomerase 104 231 - -
Trre12g03068 231 Gene3D - 104 231 - -
Trre12g03068 231 SUPERFAMILY GST C-terminal domain-like 100 230 IPR036282 -
Trre12g03068 231 SUPERFAMILY Thioredoxin-like 19 103 IPR036249 -
Trre12g03068 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 105 231 IPR010987 -
Trre12g03068 231 SFLD Glutathione Transferase (cytosolic) 22 210 IPR040079 -
Trre12g03068 231 Gene3D Glutaredoxin 18 103 - -
Trre12g03068 231 Pfam Glutathione S-transferase, C-terminal domain 142 219 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03068 Trre-Chr12 44613179 44620221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03068 17 231 Glutathione S-transferase Gene Family AT2G02380 61.395 5.36e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03068 K01800 - gmx:547590 335.88