Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03051 ATGGGTCCAAAGAAATGGTGTTTTAAGATAATATTCAGAAGGAAGAAACCTAAGGAAGATAAATCCAATCAAGAAAAGGAACAATCTACTAATGAAATATCCAATGAACCCTCCAATGGGAAGCAAAACCCTAATGAAGAATCAAGTAGCACTCCCAATGAAGGTTTGATGATGGAGAGAACAGTTCCCTCCAAGTTGATTGACAACATTGCTGCTACTAGGATTCAAAATGCATTTCGTTCATTTATGGCAAGAAGAACATTTCAAAATCTAAGCAGAGCAGAGAAATTTGACGCTTTAATTCAAGACCATATGGCCACAGACCAAACAGCAACTACACTTAACTACATACATTCATGGAGCAGAATACAAGATGAAATTAGAGCTCGCAGAATCTGCATGATAACAGCAGCCAGGATTAAGCAAAGGAGGTTGGAAAGCCAGTTAAAAGTTGAGGCTAAGATTAACGAGCTCGAGACGGAATGGTGCAGTGGTTCTGAAACAATGGAAGAGATACTTTCAAGGATACATCAGCGAGAAGAAGCAGCAATTAAACGAGAGCGAACCATGGCATATGCTTTCTCTCATCAGTGGAGGCCAAACTGTAACCAGTATTTTGGCCAGGCTTCTTATAGCCTTGGTAAAGAAAGCTGGGGTTGGAGCTGGATGGAGCGTTGGGTTGCAGCGCGTCCTTGGGAAGTTCGGGTTCAAGCTGAGTCCCCCAAAACAAAGAAACTCAACGGCCAACAGAAAAACACCAAATTAGATAAGACGAACCATAATGAAACCAAATCACCATTGGCTAAAGCTGCCCAGTTAGATAAGGTGAACCATAATGAAACCAAATCACCATTGGCTAAAGCTGCCCTGTCAAATGGGAAGGAGACTGAGAAAGGAAAGAAAAACAAAACTTAA 915 0.4131 MGPKKWCFKIIFRRKKPKEDKSNQEKEQSTNEISNEPSNGKQNPNEESSSTPNEGLMMERTVPSKLIDNIAATRIQNAFRSFMARRTFQNLSRAEKFDALIQDHMATDQTATTLNYIHSWSRIQDEIRARRICMITAARIKQRRLESQLKVEAKINELETEWCSGSETMEEILSRIHQREEAAIKRERTMAYAFSHQWRPNCNQYFGQASYSLGKESWGWSWMERWVAARPWEVRVQAESPKTKKLNGQQKNTKLDKTNHNETKSPLAKAAQLDKVNHNETKSPLAKAALSNGKETEKGKKNKT 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03051 304 MobiDBLite consensus disorder prediction 13 27 - -
Trre12g03051 304 ProSiteProfiles IQ motif profile. 68 96 IPR000048 GO:0005515
Trre12g03051 304 MobiDBLite consensus disorder prediction 12 55 - -
Trre12g03051 304 MobiDBLite consensus disorder prediction 28 55 - -
Trre12g03051 304 PANTHER IQ-DOMAIN 5-RELATED 1 264 - -
Trre12g03051 304 MobiDBLite consensus disorder prediction 249 263 - -
Trre12g03051 304 MobiDBLite consensus disorder prediction 237 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03051 Trre-Chr12 44334210 44336575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03051 6 238 IQD Protein Family AT3G15050 51.502 2.61e-81 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03051 - - mtr:25487263 486.878