Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g03050 ATGGTTAAGTTGTCACTGTTCCTCACTATTATGGAACTCTCTCTAGCTCTTGCTTTTTATGTGTTGTGTTACAATGTACCACGTCTTACCATTATTAATAAATCATCATCTTCAATTGCAAATCTCTTGTATGTTCTCCTAATTACCATTTCATTTGCATCTTCTTTTCAAGTTCTTGGTATTGCAGCACCTTGGATTTTTATGCAATTTCCTCACACCATTTACCAATTGATTGTTTTTAGCTGTGCCTCAACAAAAATGGGTCCAAAGAAATGGTGTTTTAAGATAATATTCAGAAGGAAGAAACCTAAGGAAGATAAATCCAATCAAGAAAAGGAACAATCTACTAATGAAATATCCAATGAACCCTCCAATGGGAAGCAAAACCCTAATGAAGAATCAAGTAGCACTCCCAATGAAGGTTTGATGATGGAGAGAACAGTTCCCTCCAAGTTGATTGACAACATTGCTGCTACTAGGATTCAAAATGCATTTCGTTCATTTATGGCAAGAAGAACATTTCAAAATCTAAGCAGAGCAGAGAAATTTGACGCTTTAATTCAAGACCATATGGCCACAGACCAAACAGCAACTACACTTAACTACATACATTCATGGAGCAGAATACAAGATGAAATTAGAGCTCGCAGAATCTGCATGATAACAGCAGCCAGGATTAAGCAAAGGAGGTTGGAAAGCCAGTTAAAAGTTGAGGCTAAGATTAACGAGCTCGAGACGGAATGGTGCAGTGGTTCTGAAACAATGGAAGAGATACTTTCAAGGATACATCAGCGAGAAGAAGCAGCAATTAAACGAGAGCGAACCATGGCATATGCTTTCTCTCATCAGTGGAGGCCAAACTGTAACCAGTATTTTGGCCAGGCTTCTTATAGCCTTGGTAAAGAAAGCTGGGGTTGGAGCTGGATGGAGCGTTGGGTTGCAGCGCGTCCTTGGGAAGTTCGGGTTCAAGCTGAGTCCCCCAAAACAAAGAAACTCAACGGCCAACAGAAAAACACCAAATTAGATAAGACGAACCATAATGAAACCAAATCACCATTGGCTAAAGCTGCCCAGTTAGATAAGGTGAACCATAATGAAACCAAATCACCATTGGCTAAAGCTGCCCTGTCAAATGGGAAGGAGACTGAGAAAGGAAAGAAAAACAAAACTTAA 1173 0.3973 MVKLSLFLTIMELSLALAFYVLCYNVPRLTIINKSSSSIANLLYVLLITISFASSFQVLGIAAPWIFMQFPHTIYQLIVFSCASTKMGPKKWCFKIIFRRKKPKEDKSNQEKEQSTNEISNEPSNGKQNPNEESSSTPNEGLMMERTVPSKLIDNIAATRIQNAFRSFMARRTFQNLSRAEKFDALIQDHMATDQTATTLNYIHSWSRIQDEIRARRICMITAARIKQRRLESQLKVEAKINELETEWCSGSETMEEILSRIHQREEAAIKRERTMAYAFSHQWRPNCNQYFGQASYSLGKESWGWSWMERWVAARPWEVRVQAESPKTKKLNGQQKNTKLDKTNHNETKSPLAKAAQLDKVNHNETKSPLAKAALSNGKETEKGKKNKT 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g03050 390 MobiDBLite consensus disorder prediction 335 349 - -
Trre12g03050 390 MobiDBLite consensus disorder prediction 114 141 - -
Trre12g03050 390 MobiDBLite consensus disorder prediction 323 390 - -
Trre12g03050 390 PANTHER IQ-DOMAIN 5-RELATED 87 350 - -
Trre12g03050 390 MobiDBLite consensus disorder prediction 105 141 - -
Trre12g03050 390 ProSiteProfiles IQ motif profile. 154 182 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g03050 Trre-Chr12 44334210 44337284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g03050 92 323 IQD Protein Family AT3G15050 51.724 8.86e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g03050 - - mtr:25487263 488.034