Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre12g02985 | ATGGAACATTTATGTGATGATAACTTTGAAGGATCTAATGAAGAACGACAGATTTTTACAGAAGTCTTTTTTGGTGATGATACTTTTCAGTCTAGTCAGAGGTGTGTTGTTTCTGGAGCCATCAACCTTGAACATGAATCCACTAAAAACACATTTAAATCAGTTGGCTCTAGTAATGAAAACTCGGTCATATTACGTCCCTCGTCTTCCAGATTTACACATCCTGAGGAGGACATTGTTCTAATTCAGCATTCCAATGAAACTGCTCTGGGGTGTTTGCCAGAGAGTTTAACTTGTGAAGACCAGAATGATGAGAATGTAAATGTCAAACGTATGAAGTTTTCTCTGCATGAACTTCCTTGTAGTAGATCTAATTCAGAAGATGTTTTGGGTTCATCTGGAATTCAAAAAGCAGTAATTTCCAACCTGCCGTGTGCTGCTACGAACTGTGATACTGACCCAATTGCATTTTGTACGGTTGAATCATCTAAACAGGGTGTGATATCTAGTTGCTGTCTATTGAAGCATAACTTGGTACATAATAAACATGCTTCTAATAATGACGTAGATGTTACAAATTGTAAATTTAAAACAGCAGATGGGAACATTGTAAAAGAGATCTCTGTAACTAAGGTAGTTGCTTCTCCTGTATCCCAGGAGAGTTCGGCAAACAGGCTAGTTGTAACGAGTCCATCAAACACTGTTGTGAAGAAGTCCGAGTCTCCTTTAAGAACTGAGGAAATGCCGGAAGAGTTTCAATCTTCTAATATGGTTATCTCAAAATCATTGTCAAAGCCAGGCAAAGAGGATCCCCGTCCCTTACTTCAGTTTCATATTGTGCAGATGCTTACGATGTTAGGATGGTCTATTGGGAAGCATCTACGGCCTTGTAGGCGGTGGATGGAGTCAGTCTACACAACACCAACCGGAAAAACTATTCGGGAATTTACAAAAGTTTGGAGGTTATGTGGCCAACAGTTGTCTGTTGAAAAATACAATATACCATATGGAGGCCGTAAGGAATGGACTGATATTAGGGATTTCTGGTCTGATCTTTCGAGTGCACTGACAAATGTTGAAAAATCAAAAACCCAGCAGCCAGAAACCGCTGATATGTTGGCCTATCAATGGTGGCTTTTAGATCCTTTTGTAGTAGTTATATATTTTGATAGAAAGATCGGTGCTCTGAAAAGGGGAGAGCTAATAATAAAAGCATCGTGTAGTTTATTTTATAATAAGTATAAAATGGCATATGCTCCAGTTGATTCAGCATGCGAGGACAGTTCTCGTGCTCATTCTGATCAAAAGCACGACCAAGCCATTTTCTGCAACTCTTCAACAGCCACCAGAACCACAGAAACATCTGCTTTTGTGATAAACAATCTTGTCTGTAATCAGAAATCTGATAGTATTCAAGAAGATGTGTATATTGGAGAACATAAACCAAACGTCATAGAAAATCGTTGTAGTGATATGTCAGTGGGCAGAAGTAGTATGGATCTAGTCTCCTTACCTGCTTGTGCATTGGGTAGCACCGTTACCCAATCCAGTGCTTCCTCATTCAATGTTCTTACAAGCTCTGGAAATTTGGACTTGGAATCTAAAGTGAATGCTGTTCATCAGAAAAGCTTTGATAAGCACACATCAGAAAATCAGTCTGAATGCAGTGAGGAAGAAGGGAGGAAGATCTCAATGACTTCTGTATTTGGGAAAGATAGTACATGGTCCTCCTATGATGGTGGTATTCTTAAAAAGAAAATGCGGAGGAAGTGCAAAAGGATATCTCAAATCAAACCGAGTATGTTATACCATAGTGACATACTGGGATCAACTATTACTGACCAGGTGCAGACGCTGAATGGTGATGCATGTGGCACTCAGGCTGGCTTGGAAGAAGTTCAGGATTATGTAGTTGACAGTGGGGGAAAAAAAAGGAACCACAGGCAGTTGACGGGTAGTGCAAACAAGCAACATATTAGGAAAACAAACTACTCTATTACTGAAAAAAATAAGTCCAAAAGATGCCATATTGAAGATGACGATCTATTAGTGTCAGCAATATTCAAGAATAAGGACTTCAACCCAAAGAAAGTTCGATGTAATTCTAGAGCTAAATCCGGCAAATCAAGTGGTTTGAGAAAGCTTAAAAGCAATAAAGGCCGTTGCAGGTTGCTACCAAGGAACCCTTGTAATGGTGGCAAACACAATAAGGATGGGAAGAAGTGTTATCTTGGGGAAAGGACTCTCTTGTCCTGGTTGATTGATAATGGGGTCGTATCTTTAAAAAATGTTATTCAATACCGAAATCCTAAAGATAATTCTGTCACTAAGGATGGTAGGATCACCAAAGATGGCATTGTTTGCAAGTGTTGTGGTAAGGTGTTTACATTGTCAGAGTTCAAGACTCATGCTGGGTTTACACTGAGTCGCCCTTGCTTGAATCTTTTCATGAAGTCTGGTGAGCCATTTACACTTCGCCTCCTTCAAGCTTGGTCAGCTGAATACAAATCCCGGAAAAGTCAAAATCAAGCTGTGAATGTTGTTGATAATGACAGAAATGATGACTCGTGCGGGTTGTGTGGTGAGGGAGGTGAGCTGATATGTTGTGATAACTGTCCGTCTACTTATCACCTGGCTTGTTTGTCCACTCAGGAGATCCCTGATGGCAACTGGTACTGCACAAACTGCACTTGTCGGATTTGTGGTAATTTGGTCATTGACAAAGAGGCTTCAGATACACATGATTCATTACAATGTTCACAATGCGAACATAAATATCACGAGAAATGCCTAGGAGAAGGAGATAAACAAGAAGGAGCAGTTTCAGAGACTTGGTTTTGTAGTCAGAGTTGTCAGGAGGTATACTCCAGTCTCCAATCTCAGGTAGGGCTAGTTAATCAAGTTGCTGATGGCTTCTCATGGACGCTTCTTAGATGCATACACGATGACCAAAAGGTTCATTCTGCTCAGTGGCTTGCCCTAAAGGCAGTATGCAATACAAAATTAGCTGTTGCACTTACCATCATGGAGGAGTGTTTTGTGTCAATGTTAGATCTAAGAACAGGCATCCACATGTTACCCCAAGTTTTATACAATTGGGGGTCTGATTTTGCTCGTCTGAATTTTCAAGGGTTTTACACCGTGGTGCTGGAGAAACAGGATGTATTAATATCTGTAGCATCTATCAGAGTGCATGGAACTTCAGTTGCAGAGATGCCTCTAATTGCAACTTGCAGTCGGTATCGCCGCCAAGGAATGTGCCGACGCCTTGTGAGCTCAATCGAAGAGATGTTAATGTCTGTCAAGGTAGAAAAGCTTGTGGTATCCGCCATTCCCGATCTGGTGGAGACATGGACCAAGGGCTTTGGTTTTGTACCTGTAGGTGACATTGAAAAGCGGAGATTAAAAAAACTCAACTTAATGGTTTTTCCTGGAACAGTGTTACTTGAAAAATCCTTGTATGGCAAGAAGAAAAATGAAGGGCTGTGTGATCAATCAACTTTAGCAACAGATGACTCGTTCAAAGTAGATATCTGTTCCAAAGAAATGGCAATAGCCGAATCATTGCCGCAAGATGCTGGGAATGTAACTGCCATTGAAGTTGGTGCTAAGTCAGAGTATGAACCTATCGACTGCAAAAATCAACTAGACAATAAGGCTGATTGTGAAACCAGCAGAGATGATAATACTCAAGCTGTTGAAATTGCTTTAGGAGGCAAAGAATCAACAGAGACATGTAGGTCTTTCAGTGAAGGGGAAATCACCCCTTTTGAAGGACACAATGTGCAGGAATTGAGAATATGCCACAACATGCAAATTGAGAACTCTTGTGCCAACAAAGATGGTACTGAATCAGGTGTAAGACTTGTTGAGGACAATAATATCGAAATAGGTGAAGTTGAGGAAAGTGCTTTGTTGCACGGACATGTTTCAAATGCGCCGTGCAAAACTTTTTCGGGCAACAATTTTGATGCAGTTTCTAATTTTGAATGCTCAGTGATGTATGATGAAACATCTATTTTTGGAACATTAGCAAACTCGGCAAAATCAATGGAAAGTTGA | 4062 | 0.4047 | MEHLCDDNFEGSNEERQIFTEVFFGDDTFQSSQRCVVSGAINLEHESTKNTFKSVGSSNENSVILRPSSSRFTHPEEDIVLIQHSNETALGCLPESLTCEDQNDENVNVKRMKFSLHELPCSRSNSEDVLGSSGIQKAVISNLPCAATNCDTDPIAFCTVESSKQGVISSCCLLKHNLVHNKHASNNDVDVTNCKFKTADGNIVKEISVTKVVASPVSQESSANRLVVTSPSNTVVKKSESPLRTEEMPEEFQSSNMVISKSLSKPGKEDPRPLLQFHIVQMLTMLGWSIGKHLRPCRRWMESVYTTPTGKTIREFTKVWRLCGQQLSVEKYNIPYGGRKEWTDIRDFWSDLSSALTNVEKSKTQQPETADMLAYQWWLLDPFVVVIYFDRKIGALKRGELIIKASCSLFYNKYKMAYAPVDSACEDSSRAHSDQKHDQAIFCNSSTATRTTETSAFVINNLVCNQKSDSIQEDVYIGEHKPNVIENRCSDMSVGRSSMDLVSLPACALGSTVTQSSASSFNVLTSSGNLDLESKVNAVHQKSFDKHTSENQSECSEEEGRKISMTSVFGKDSTWSSYDGGILKKKMRRKCKRISQIKPSMLYHSDILGSTITDQVQTLNGDACGTQAGLEEVQDYVVDSGGKKRNHRQLTGSANKQHIRKTNYSITEKNKSKRCHIEDDDLLVSAIFKNKDFNPKKVRCNSRAKSGKSSGLRKLKSNKGRCRLLPRNPCNGGKHNKDGKKCYLGERTLLSWLIDNGVVSLKNVIQYRNPKDNSVTKDGRITKDGIVCKCCGKVFTLSEFKTHAGFTLSRPCLNLFMKSGEPFTLRLLQAWSAEYKSRKSQNQAVNVVDNDRNDDSCGLCGEGGELICCDNCPSTYHLACLSTQEIPDGNWYCTNCTCRICGNLVIDKEASDTHDSLQCSQCEHKYHEKCLGEGDKQEGAVSETWFCSQSCQEVYSSLQSQVGLVNQVADGFSWTLLRCIHDDQKVHSAQWLALKAVCNTKLAVALTIMEECFVSMLDLRTGIHMLPQVLYNWGSDFARLNFQGFYTVVLEKQDVLISVASIRVHGTSVAEMPLIATCSRYRRQGMCRRLVSSIEEMLMSVKVEKLVVSAIPDLVETWTKGFGFVPVGDIEKRRLKKLNLMVFPGTVLLEKSLYGKKKNEGLCDQSTLATDDSFKVDICSKEMAIAESLPQDAGNVTAIEVGAKSEYEPIDCKNQLDNKADCETSRDDNTQAVEIALGGKESTETCRSFSEGEITPFEGHNVQELRICHNMQIENSCANKDGTESGVRLVEDNNIEIGEVEESALLHGHVSNAPCKTFSGNNFDAVSNFECSVMYDETSIFGTLANSAKSMES | 1353 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre12g02985 | 1353 | PANTHER | PHD FINGER FAMILY PROTEIN | 2 | 1282 | - | - | |
| Trre12g02985 | 1353 | CDD | PHD_SF | 897 | 949 | - | - | |
| Trre12g02985 | 1353 | SUPERFAMILY | FYVE/PHD zinc finger | 842 | 897 | IPR011011 | - | |
| Trre12g02985 | 1353 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 901 | 956 | IPR013083 | - | |
| Trre12g02985 | 1353 | SUPERFAMILY | FYVE/PHD zinc finger | 897 | 948 | IPR011011 | - | |
| Trre12g02985 | 1353 | SMART | PHD_3 | 856 | 897 | IPR001965 | - | |
| Trre12g02985 | 1353 | SMART | PHD_3 | 898 | 952 | IPR001965 | - | |
| Trre12g02985 | 1353 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 846 | 900 | IPR013083 | - | |
| Trre12g02985 | 1353 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 1005 | 1130 | IPR016181 | - | |
| Trre12g02985 | 1353 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 1004 | 1154 | IPR000182 | GO:0016747 |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre12g02985 | - | - | mtr:25487250 | 2194.08 |
Showing 1 to 1 of 1 entries