Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02927 ATGGATGCAAGTGCTTCTGTAATGCTTGCAGAGTTGGCATTGGAGGCTGGTTTACCTGAGGGTGTCTTAAATATTGTTCATGGAACCCATGATATTGTGAATGCCATTTGTGACGATGACGATATCAAAGCCATATCATTTGTTGGTTTGAATGTTGCTGGAATGCACATATATTCAAGAGCAGCTGCTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTATAAATGCATCAGTTTATTAA 288 0.3958 MDASASVMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGLNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATINASVY 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02927 95 Pfam Aldehyde dehydrogenase family 6 94 IPR015590 GO:0016491
Trre12g02927 95 SUPERFAMILY ALDH-like 6 93 IPR016161 GO:0016491
Trre12g02927 95 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 95 IPR016162 GO:0016491
Trre12g02927 95 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 3 92 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02927 Trre-Chr12 42056928 42057849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02927 2 91 Aldehyde Dehydrogenase Gene Family AT2G14170 78.889 6.21e-48 158