Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02828 ATGAGGAGTTTCTTCAACCCTTGGATAATGGTTGCATTGGTCATACTTCTTCCCGTTCTTCTCTCTCTCAGAAATCCTCGAGGTGAACCAGAGAATCTTATGACACAAACAACCACTTCTTCTCATACTTCTTTCTCTGGTACTTCTTTTGGTACTGTGAAGTTAGCCAACACTTTTCCATTTGAGTTCAATCTCAGGATCAGAGATGGTTCCAATCTTCAGTATGATTTCTACAGAGATTCTTGTTCTCAAGCTGAGGATATTATTCGTTCTTCAGTTGCTGATATTTTCTTTGATCATAGAACGTTTGCTGCTTCTATTCTTCGTCTCTTCTTTCATGATTGCTTCATTCAGGGCTGTGATGCTTCACTACTGTTGGAGGATAGAAACAGTTCTTCTGAGAAGCAGGCTATTCCAAATCAGACATTGAAAGATTTTGACAAAATTGACTTGATTAAGGAGGAAGTGGAAAAAGCATGTCCTGGCGTTGTGTCTTGTGCTGATATACTTGCTCTTGCAGCAAGAGATGCTGTTCTTTTGGCTGGTGGACCTTTCTATCCAGTTTTAACCGGCAGACGAGATAGCCGTCAATCGTATTTTCAGGAAGCAACTGATCAAATTCCAAGACCTGATGATAACGTTACGCGCACACTTCAACTCTTCAATCTTAGAGGATTCAATGCCCGGGAGACAGTCAGCCTTCTTGGAGCACACAACATCGGACAAATCGGCTGTGATTTCATTCAGCAAAGGCTATACAACTTTCAAGGAACAAGACAACCAGACCCGAGTATACCTCTCGATTTCCTTAATGATATGAGGCGAAATTGTCCACCAGACAACAAGAATACTAGTACCAACAGCAGCACTAACAAGTTTTCGACGTTTACGATTTCAAAGCCAATGAATATTCATCACTCTGAAAAGAAAGGGATGTCATACATGCAAGCATTGTCATCTGCAATATCATCTGGAAAATCATTTGACACTCACTACTATCAGAGCTTGTTGCAAGGAAGAGGGTTACTGTTTGCTGATCAACAGCTGATGGCTCAAGAGAAGACTGCAAGATTGGTTTCTGCTTATGCTTCGGACGATGGATCGACCTTTCGGATGGATTTCGCTGCGGTTATGTTGAAATTGTCTAATCTTGATGTCTTGACTGGAAACCAAGGCGAGGTTCGTCTGAATTGTTCCCAACTGAGAAATTCTTAA 1215 0.414 MRSFFNPWIMVALVILLPVLLSLRNPRGEPENLMTQTTTSSHTSFSGTSFGTVKLANTFPFEFNLRIRDGSNLQYDFYRDSCSQAEDIIRSSVADIFFDHRTFAASILRLFFHDCFIQGCDASLLLEDRNSSSEKQAIPNQTLKDFDKIDLIKEEVEKACPGVVSCADILALAARDAVLLAGGPFYPVLTGRRDSRQSYFQEATDQIPRPDDNVTRTLQLFNLRGFNARETVSLLGAHNIGQIGCDFIQQRLYNFQGTRQPDPSIPLDFLNDMRRNCPPDNKNTSTNSSTNKFSTFTISKPMNIHHSEKKGMSYMQALSSAISSGKSFDTHYYQSLLQGRGLLFADQQLMAQEKTARLVSAYASDDGSTFRMDFAAVMLKLSNLDVLTGNQGEVRLNCSQLRNS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02828 404 Gene3D Peroxidase, domain 2 208 287 - -
Trre12g02828 404 PRINTS Plant peroxidase signature 144 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Plant peroxidase signature 319 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Plant peroxidase signature 376 389 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Plant peroxidase signature 182 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Plant peroxidase signature 82 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Plant peroxidase signature 163 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Plant peroxidase signature 229 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Plant peroxidase signature 335 352 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Plant peroxidase signature 106 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 FunFam Peroxidase 76 219 - -
Trre12g02828 404 CDD secretory_peroxidase 72 399 IPR033905 GO:0004601|GO:0042744
Trre12g02828 404 Gene3D Peroxidase, domain 2 321 381 - -
Trre12g02828 404 Pfam Peroxidase 90 365 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 SUPERFAMILY Heme-dependent peroxidases 72 400 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 ProSitePatterns Peroxidases active site signature. 104 115 IPR019794 GO:0004601
Trre12g02828 404 Gene3D - 77 207 - -
Trre12g02828 404 PRINTS Haem peroxidase superfamily signature 104 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Haem peroxidase superfamily signature 164 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Haem peroxidase superfamily signature 182 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Haem peroxidase superfamily signature 321 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 ProSiteProfiles Plant heme peroxidase family profile. 72 402 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g02828 404 Gene3D - 382 400 - -
Trre12g02828 404 PANTHER PEROXIDASE 25-RELATED 46 390 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02828 Trre-Chr12 36019803 36022569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02828 69 400 Peroxidase AT4G33870 46.647 6.06e-99 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02828 K00430 - gmx:100804973 545.428