Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02795 ATGCCCCTATCTCCTTCTTCCATGGCTTCTTCAATCCCTCATCACTATTATTCAAACTACACCTCTGATCATTTCACCACACAACAAGGTTTGTCTTCACATAATAATAACATTATTAATACCTCAATTTTGGACAATACTATGATGTGGGGTTTTCAAGAAAATTTAATGCCTGTTTTTGATAATTATGGAGCATTTGATCAAATTGTGTCACTTGATTGTGATACTATGTCTTCTTCTCGTGCTTGGATTCATCCAAATTTTGTCGAGCAACAAGATTTCGCTGTTCCGGCTTTGTTGTCAGATTGTAAATTGGGATTTTATGGTGGTGGGATTCAGAATTTTAATGGAAGATATAATAATCAGCCACCTATTGGTCATGAGTTTGTAGAAGATCAATGTTGTGGTTTTGTTGAAGATATTAAACCACCTCCACCTTATCCTAATGCTGCAAGAGAAAATTGGGGGATACAAGGTAATCAAATAACAGCGGTTGAAGAACCAAACATAAAGTATGCATGTCGGAAAACTTTAGCCGATAGAAGAGTGAGAGTGAGAGGAAGGTTTGCAAGGAACAATGAGATATGTGAAGAAGATCACATGGCCACAAAAAAGCTTGAGAATCATCATGATGATCACATCAATGATGACTTTTATGGTTCTGATTCATTCCAATTCCAGTTAAAGAATGAGGAGGAGGACTGGCTTCAAGAGGCTATGGCAAGTTTGGTGTATTTATCTCATTCATCACCGGATGATATGTGA 765 0.3712 MPLSPSSMASSIPHHYYSNYTSDHFTTQQGLSSHNNNIINTSILDNTMMWGFQENLMPVFDNYGAFDQIVSLDCDTMSSSRAWIHPNFVEQQDFAVPALLSDCKLGFYGGGIQNFNGRYNNQPPIGHEFVEDQCCGFVEDIKPPPPYPNAARENWGIQGNQITAVEEPNIKYACRKTLADRRVRVRGRFARNNEICEEDHMATKKLENHHDDHINDDFYGSDSFQFQLKNEEEDWLQEAMASLVYLSHSSPDDM 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02795 254 Pfam CCT motif 168 192 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02795 Trre-Chr12 34869203 34871662 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre12g02795 CCT 3.4e-09 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02795 - - cam:101492034 356.681