Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02633 ATGAACAACATATCGGTAGACGAAGTGGAAAGGTATTGTTTCGCTAATCTGGAGATTGCTTACAAGTTCTACTACTGGTATGGAAGAACAACTGGGTTTTCCGTGTGCAAGATTCGTGTTGTGAGGAATGTTGTTGGTGAAGTTGTTCAGCAAACATTTTTATGTTCTCGCGAAGGATATAGAGAATCTAATGGACATAGAAAGATGACAGAGGCGGATGTTCAGGATATTGGGAGTCATGGAAATGTTAGGATAAGACCATATCAGATGTATGGTGCAATGGCTAATTCAGCGGGGGGTTCCACAAGGCTAGAACGACTGTTTTGGTGCGATGGAGAAAGTAGGAAGTGTTGGAACAAAGCTCTGAAGGACTCAGAAGCTAAAAGACCTCAAGAAGCTATGGCAACAGCATCAGAAGCAAAAAGAATTTACATCACTCAAGAACTGACAGAATCAGATTCAATGATTGAAGAACCACCTATTTCAAGGCTCTGTCACATCCACAAGAAGGAATATTCGTTGGTACAACGTTAA 534 0.412 MNNISVDEVERYCFANLEIAYKFYYWYGRTTGFSVCKIRVVRNVVGEVVQQTFLCSREGYRESNGHRKMTEADVQDIGSHGNVRIRPYQMYGAMANSAGGSTRLERLFWCDGESRKCWNKALKDSEAKRPQEAMATASEAKRIYITQELTESDSMIEEPPISRLCHIHKKEYSLVQR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02633 177 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 70 - -
Trre12g02633 177 Pfam FAR1 DNA-binding domain 22 86 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02633 Trre-Chr12 31436472 31437560 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre12g02633 FAR1 8.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02633 - - tpra:123886262 89.7373