Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02602 ATGGCTGATGAAGTGATTCTTCTAGATTTCTGGCCAAGTCCATTTGGTATGAGAATCAGAATAGCATTTGCTGAAAAGGGTATCAAATATGAATACAAAGAAGAAGACTTAAGGAACAAAAGCCCTTTGTTGTTACAAATGAACCCTGTTCATAAGAAAATCCCTGTTCTTATTCACAATGGTAAACCCATTGCTGAATCTCTCATTGCTGTTCAGTATATTGATGAAGTTTGGAATGATAAATCTTCTCTGTTACCTTCTGATCCTTATCAGAGATCACAAGCTAGATTCTGGGCTGATTTTGCTGACAAAAAGATATTTGAAGTTGGAAGGAAGCTTTTGGCCAAAAAAGGAGAAGAGCAAGAAGCTGCCAAGAAGGAATTCATAGAAGCCATCAAATTGTTGGAGCAAGAGTTGGGAGACAAGACTTATTTTGGAGGAGACAAGCTTGGTTATGTGGATGTAGCACTCATTCCATTCTACACTTGGTTTAAAGGCTATGAGACTTTTGGAAACATCAATATAGAGAAGGAAAGCCCCAAGTTCATTGCTTGGGCCAAGAGATGCATCAAGATTGAAAGTGTCTCCAAGTCTCTTCCTGATCAGGATAAGCTATATGGATTCATTGTAGAGTTCAGGAAGATAATGGTGGGAGATGTTGGGCCAAACTGA 672 0.3884 MADEVILLDFWPSPFGMRIRIAFAEKGIKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPIAESLIAVQYIDEVWNDKSSLLPSDPYQRSQARFWADFADKKIFEVGRKLLAKKGEEQEAAKKEFIEAIKLLEQELGDKTYFGGDKLGYVDVALIPFYTWFKGYETFGNINIEKESPKFIAWAKRCIKIESVSKSLPDQDKLYGFIVEFRKIMVGDVGPN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02602 223 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Trre12g02602 223 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Trre12g02602 223 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Trre12g02602 223 Gene3D - 88 218 - -
Trre12g02602 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 206 IPR045073 -
Trre12g02602 223 FunFam Glutathione S-transferase U20 88 219 - -
Trre12g02602 223 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Trre12g02602 223 CDD GST_N_Tau 5 78 - -
Trre12g02602 223 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Trre12g02602 223 Gene3D Glutaredoxin 1 87 - -
Trre12g02602 223 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Trre12g02602 223 Coils Coil 118 138 - -
Trre12g02602 223 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Trre12g02602 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Trre12g02602 223 FunFam Tau class glutathione S-transferase 1 87 - -
Trre12g02602 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02602 Trre-Chr12 30959543 30960548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02602 1 217 Glutathione S-transferase Gene Family AT1G78380 69.124 6.01e-112 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02602 K00799 - gmx:547520 370.933