Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02600 ATGGCTAACGAGGTTGTTCGGTTGGATTCATGGGCAAGCATGTATGGGATGAGGGTTAGGATTGCATTAGCTGAAAAGGGTGTTCAATATGAATACAAAGAACAAAATCTCATTAATAAGAGTCCTTTACTTCTTCAAATGAATCCAATTCACAAGAAAATTCCAGTTCTTATCCATAATGGAAAAACCATTTGTGAATCTGCAATTATTGTGCAATACATAGATGATGTTTGGAATGATAAAGCTCCAATCATGCCCTCTAACCCATATGAGAAAGCTCAAGCAAGATTCTGGGTTGATTATATTGACAAAAAGGTGTATGATACATGGAAAAAAATTTGGCTTTCAAAAATTTGGCTTTCAAAAGGGGTACGTTGGTTTTATACTTATGAGGCATTATATGGTAACTTCAAAATTGAATTGAAGTGTCCTAAACTCATTGTTTGGGCCAAGAGATGCATGGAGAAAGAGAGTGTGTCAAAAACTCTTCCTGATCAGAAGAAGTTGTATGATTATATTGTGAGTGTGACAAAAGCACTTGGTTTGGATTAA 552 0.3533 MANEVVRLDSWASMYGMRVRIALAEKGVQYEYKEQNLINKSPLLLQMNPIHKKIPVLIHNGKTICESAIIVQYIDDVWNDKAPIMPSNPYEKAQARFWVDYIDKKVYDTWKKIWLSKIWLSKGVRWFYTYEALYGNFKIELKCPKLIVWAKRCMEKESVSKTLPDQKKLYDYIVSVTKALGLD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02600 183 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Trre12g02600 183 Gene3D - 121 183 - -
Trre12g02600 183 FunFam Tau class glutathione S-transferase 1 87 - -
Trre12g02600 183 SFLD Main (cytGST) 10 118 - -
Trre12g02600 183 SUPERFAMILY GST C-terminal domain-like 76 177 IPR036282 -
Trre12g02600 183 Gene3D Glutaredoxin 1 84 - -
Trre12g02600 183 CDD GST_N_Tau 5 78 - -
Trre12g02600 183 CDD GST_C_Tau 89 173 IPR045074 GO:0004364|GO:0006749
Trre12g02600 183 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 111 IPR045073 -
Trre12g02600 183 SFLD Glutathione Transferase (cytosolic) 10 118 IPR040079 -
Trre12g02600 183 Gene3D - 85 120 - -
Trre12g02600 183 SUPERFAMILY Thioredoxin-like 11 106 IPR036249 -
Trre12g02600 183 Pfam Glutathione S-transferase, N-terminal domain 11 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02600 Trre-Chr12 30939174 30941274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02600 1 180 Glutathione S-transferase Gene Family AT1G78380 49.770 6.53e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02600 K00799 - gmx:547950 288.115